Annotation Detail for GALNTL4
Basic Information Top
| Gene Symbol: | GALNTL4 ( GALNT15,GALNT18,GalNAc-T15,MGC71806 ) |
|---|---|
| Gene Full Name: | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4 |
| Band: | 11p15.3 |
| Quick Links | Entrez ID:374378; OMIM: NA; Uniprot ID:GLTL4_HUMAN; ENSEMBL ID: ENSG00000110328; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.655152
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 8 / 564012 | 14 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 37 / 1939121 | 19 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 25 / 136302 | 183 |  |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 52 / 3360307 | 15 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 3 / 123478 | 24 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 40 / 1100989 | 36 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 1 / 211054 | 4 | |
| heart | 2 / 89626 | 22 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 0 / 24145 | 0 | |
| liver | 1 / 207743 | 4 | |
| lung | 4 / 336974 | 11 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 25 / 67052 | 372 |  |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 5 / 280825 | 17 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 3 / 53952 | 55 | |
| stomach | 0 / 96619 | 0 | |
| testis | 5 / 330442 | 15 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_14043_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.05 ± 0.73 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.69 ± 0.62 | |
| Basal Part of Pons | 3.82 ± 0.51 | |
| Cerebellar Cortex | 5.03 ± 0.3 | |
| Cerebellar Nuclei | 3.48 ± 0.34 | |
| Claustrum | 4.77 ± 0.68 | |
| Epithalamus | 3.81 ± 0.75 | |
| Frontal Lobe | 4.23 ± 0.81 | |
| Globus Pallidus | 3.34 ± 0.51 | |
| Hypothalamus | 3.55 ± 0.46 | |
| Insula | 4.54 ± 0.36 | |
| Limbic Lobe | 5.02 ± 0.72 | |
| Mesencephalon | 4.35 ± 0.76 | |
| Myelencephalon | 4.43 ± 0.72 | |
| Occipital Lobe | 4.65 ± 0.6 | |
| Parietal Lobe | 4.47 ± 0.76 | |
| Pontine Tegmentum | 4.51 ± 0.69 | |
| Striatum | 4.53 ± 0.71 | |
| Subthalamus | 3.7 ± 0.48 | |
| Temporal Lobe | 4.64 ± 0.61 | |
| Thalamus | 4.45 ± 0.54 | |
| White Matter | 2.87 ± 0.7 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Galntl4 | CB | Cerebellum | 46.97 | |
| 37.25 | | |||
| Galntl4 | CTX | Cerebral cortex | 75.64 | |
| 60.07 | | |||
| Galntl4 | HIP | Hippocampal region | 83.87 | |
| 100 | | |||
| Galntl4 | HPF | Hippocampal formation | 88.05 | |
| 100 | | |||
| Galntl4 | HY | Hypothalamus | 30.11 | |
| 19.63 | | |||
| Galntl4 | LSX | Lateral septal complex | 70.28 | |
| 48.6 | | |||
| Galntl4 | MB | Midbrain | 21.13 | |
| 14.49 | | |||
| Galntl4 | MY | Medulla | 26.01 | |
| 22.12 | | |||
| Galntl4 | OLF | Olfactory bulb | 67.31 | |
| 54.03 | | |||
| Galntl4 | P | Pons | 22.16 | |
| 18.83 | | |||
| Galntl4 | PAL | Pallidum | 40.39 | |
| 32.78 | | |||
| Galntl4 | RHP | Retrohippocampal region | 94.71 | |
| 96.25 | | |||
| Galntl4 | sAMY | Striatum-like amygdalar nuclei | 45.67 | |
| 29.95 | | |||
| Galntl4 | STR | Striatum | 68.46 | |
| 45.03 | | |||
| Galntl4 | STRd | Striatum dorsal region | 67.64 | |
| 43.61 | | |||
| Galntl4 | STRv | Striatum ventral region | 70.42 | |
| 57.97 | | |||
| Galntl4 | TH | Thalamus | 37.86 | |
| 28.24 | |