Annotation Detail for WASH3P
Basic Information Top
| Gene Symbol: | WASH3P ( FAM39DP,FLJ25222,FLJ57306,FLJ75027,FLJ77846,FLJ78059,MGC117230,MGC52000 ) |
|---|---|
| Gene Full Name: | WAS protein family homolog 3 pseudogene |
| Band: | 15q26.3 |
| Quick Links | Entrez ID:374666; OMIM: NA; Uniprot ID:; ENSEMBL ID: ; HGNC ID: 24362 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.459573
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 4 / 62319 | 64 |  |
| fetus | 34 / 564012 | 60 | |
| neonate | 1 / 31097 | 32 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 5 / 55556 | 89 | |
| adult | 129 / 1939121 | 66 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 3 / 34366 | 87 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 11 / 114246 | 96 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 10 / 119369 | 83 | |
| germ cell tumor | 11 / 263845 | 41 | |
| glioma | 12 / 106883 | 112 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 5 / 68959 | 72 | |
| leukemia | 7 / 95842 | 73 | |
| liver tumor | 1 / 96359 | 10 |  |
| lung tumor | 11 / 103127 | 106 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 7 / 97250 | 71 | |
| normal | 222 / 3360307 | 66 | |
| ovarian tumor | 7 / 76682 | 91 | |
| pancreatic tumor | 5 / 104616 | 47 | |
| primitive neuroectodermal tumor of the CNS | 6 / 125680 | 47 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 12 / 124949 | 96 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 6 / 90257 | 66 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 4 / 33197 | 120 | |
| ascites | 4 / 40015 | 99 | |
| bladder | 1 / 29757 | 33 | |
| blood | 11 / 123478 | 89 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 98 / 1100989 | 89 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 7 / 215722 | 32 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 8 / 211054 | 37 | |
| heart | 8 / 89626 | 89 | |
| intestine | 17 / 234472 | 72 | |
| kidney | 14 / 211777 | 66 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 21 / 336974 | 62 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 7 / 91610 | 76 | |
| mammary gland | 7 / 153271 | 45 | |
| mouth | 3 / 67052 | 44 | |
| muscle | 4 / 107715 | 37 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 9 / 102051 | 88 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 13 / 280825 | 46 | |
| prostate | 11 / 189345 | 58 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 16 / 210574 | 75 | |
| spleen | 9 / 53952 | 166 | |
| stomach | 7 / 96619 | 72 | |
| testis | 20 / 330442 | 60 | |
| thymus | 8 / 81131 | 98 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 14 / 232878 | 60 | |
| vascular | 0 / 51780 | 0 |
- Probe name: A_23_P11742
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 11.92 ± 0.25 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 12.5 ± 0.23 | |
| Basal Part of Pons | 12.28 ± 0.16 | |
| Cerebellar Cortex | 12.35 ± 0.21 | |
| Cerebellar Nuclei | 12.29 ± 0.25 | |
| Claustrum | 11.83 ± 0.25 | |
| Epithalamus | 12.08 ± 0.31 | |
| Frontal Lobe | 12.03 ± 0.25 | |
| Globus Pallidus | 12.33 ± 0.23 | |
| Hypothalamus | 12 ± 0.28 | |
| Insula | 11.96 ± 0.11 | |
| Limbic Lobe | 12.01 ± 0.25 | |
| Mesencephalon | 12.09 ± 0.28 | |
| Myelencephalon | 12.09 ± 0.3 | |
| Occipital Lobe | 12.39 ± 0.34 | |
| Parietal Lobe | 12.15 ± 0.25 | |
| Pontine Tegmentum | 12.01 ± 0.26 | |
| Striatum | 12.06 ± 0.31 | |
| Subthalamus | 12.23 ± 0.28 | |
| Temporal Lobe | 12.02 ± 0.23 | |
| Thalamus | 12.14 ± 0.31 | |
| White Matter | 12.71 ± 0.1 | |
Mouse Brain ISH 