AutismKB 2.0

Annotation Detail for KIF3C


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Basic Information Top
Gene Symbol:KIF3C ( - )
Gene Full Name: kinesin family member 3C
Band: 2p23.3
Quick LinksEntrez ID:3797; OMIM: 602845; Uniprot ID:KIF3C_HUMAN; ENSEMBL ID: ENSG00000084731; HGNC ID: 6321
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body4 / 7076156
blastocyst1 / 6231916
fetus29 / 56401251
neonate0 / 310970 
infant5 / 23620211
juvenile6 / 55556107
adult79 / 193912140
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor4 / 9417842
cervical tumor0 / 343660 
chondrosarcoma10 / 82823120
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor12 / 26384545
glioma13 / 106883121
head and neck tumor4 / 13630229
kidney tumor2 / 6895929
leukemia0 / 958420 
liver tumor5 / 9635951
lung tumor2 / 10312719
lymphoma2 / 7175527
non-neoplasia2 / 9725020
normal173 / 336030751
ovarian tumor0 / 766820 
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer1 / 1026809
retinoblastoma5 / 46356107
skin tumor6 / 12494948
soft tissue/muscle tissue tumor10 / 12519179
uterine tumor6 / 9025766
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood3 / 12347824
bone5 / 7165569
bone marrow0 / 488010 
brain111 / 1100989100
cervix0 / 481710 
connective tissue10 / 14925566
ear0 / 162120 
embryonic tissue8 / 21572237
esophagus0 / 202090 
eye28 / 211054132
heart3 / 8962633
intestine2 / 2344728
kidney2 / 2117779
larynx1 / 2414541
liver5 / 20774324
lung17 / 33697450
lymph0 / 442700 
lymph node0 / 916100 
mammary gland4 / 15327126
mouth0 / 670520 
muscle1 / 1077159
nerve3 / 15768190
ovary0 / 1020510 
pancreas7 / 21481232
parathyroid8 / 20539389
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta2 / 2808257
prostate4 / 18934521
salivary gland3 / 20155148
skin8 / 21057437
spleen0 / 539520 
stomach0 / 966190 
testis5 / 33044215
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus17 / 23287872
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 203390_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts7
Adipocyte5.8
AdrenalCortex6.9
Adrenalgland10.65
Amygdala123.15
Appendix6.55
AtrioventricularNode4.3
BDCA4+_DentriticCells5.65
Bonemarrow5.75
BronchialEpithelialCells5.8
CD105+_Endothelial5.5
CD14+_Monocytes5.75
CD19+_BCells(neg._sel.)5.75
CD33+_Myeloid6.95
CD34+7.6
CD4+_Tcells6.35
CD56+_NKCells7.15
CD71+_EarlyErythroid4.95
CD8+_Tcells5.65
CardiacMyocytes7.25
Caudatenucleus17.55
Cerebellum57.85
CerebellumPeduncles32.5
CiliaryGanglion4
CingulateCortex35.05
Colorectaladenocarcinoma5.85
DorsalRootGanglion4.55
FetalThyroid5.65
Fetalbrain124.65
Fetalliver5.3
Fetallung4.95
GlobusPallidus31.45
Heart7.5
Hypothalamus21.9
Kidney4.8
Leukemia_chronicMyelogenousK-5625.3
Leukemia_promyelocytic-HL-605.15
Leukemialymphoblastic(MOLT-4)4.75
Liver7.8
Lung6.5
Lymphnode5.05
Lymphoma_burkitts(Daudi)7.15
Lymphoma_burkitts(Raji)7.95
MedullaOblongata48.2
OccipitalLobe105.45
OlfactoryBulb6.8
Ovary3.8
Pancreas4.65
PancreaticIslet6.2
ParietalLobe39
Pituitary11.6
Placenta6.1
Pons28.5
PrefrontalCortex20.15
Prostate6.95
Salivarygland4.6
SkeletalMuscle6.75
Skin4.35
SmoothMuscle6.65
Spinalcord11.3
SubthalamicNucleus21.8
SuperiorCervicalGanglion6.85
TemporalLobe69.9
Testis5.1
TestisGermCell5
TestisIntersitial4.9
TestisLeydigCell5.7
TestisSeminiferousTubule5.05
Thalamus12.65
Thymus4.7
Thyroid7.4
Tongue5.6
Tonsil5.65
Trachea4.9
TrigeminalGanglion6.05
Uterus4.7
UterusCorpus5.15
WholeBlood6.5
Wholebrain175.8
colon5.85
pineal_day7.58
pineal_night7.18
retina7.55
small_intestine5.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P303523
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.76 ± 0.53
Basal Forebrain6.11 ± 0.39
Basal Part of Pons6.85 ± 0.33
Cerebellar Cortex6.32 ± 0.39
Cerebellar Nuclei6.53 ± 0.5
Claustrum6.66 ± 0.66
Epithalamus5.15 ± 0.87
Frontal Lobe6.58 ± 0.55
Globus Pallidus4.93 ± 0.57
Hypothalamus5.92 ± 0.62
Insula6.49 ± 0.39
Limbic Lobe6.75 ± 0.6
Mesencephalon6.3 ± 0.78
Myelencephalon6.38 ± 0.7
Occipital Lobe6.21 ± 0.64
Parietal Lobe6.41 ± 0.6
Pontine Tegmentum6.32 ± 0.63
Striatum5.9 ± 0.62
Subthalamus6.09 ± 0.37
Temporal Lobe6.64 ± 0.43
Thalamus6.44 ± 0.57
White Matter3.92 ± 0.17
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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