AutismKB 2.0

Annotation Detail for C6orf174


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Basic Information Top
Gene Symbol:C6orf174 ( dJ403A15.3 )
Gene Full Name: chromosome 6 open reading frame 174
Band: 6q22.33
Quick LinksEntrez ID:387104; OMIM: NA; Uniprot ID:CF174_HUMAN; ENSEMBL ID: ENSG00000214338; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst1 / 6231916
fetus58 / 564012102
neonate0 / 310970 
infant2 / 2362084
juvenile0 / 555560 
adult29 / 193912114
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor5 / 26384518
glioma4 / 10688337
head and neck tumor1 / 1363027
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor2 / 10312719
lymphoma1 / 7175513
non-neoplasia0 / 972500 
normal144 / 336030742
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS5 / 12568039
prostate cancer1 / 1026809
retinoblastoma4 / 4635686
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain105 / 110098995
cervix0 / 481710 
connective tissue3 / 14925520
ear0 / 162120 
embryonic tissue3 / 21572213
esophagus0 / 202090 
eye9 / 21105442
heart3 / 8962633
intestine0 / 2344720 
kidney3 / 21177714
larynx0 / 241450 
liver0 / 2077430 
lung7 / 33697420
lymph0 / 442700 
lymph node1 / 9161010
mammary gland1 / 1532716
mouth2 / 6705229
muscle4 / 10771537
nerve0 / 157680 
ovary0 / 1020510 
pancreas6 / 21481227
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland3 / 16585180
placenta0 / 2808250 
prostate2 / 18934510
salivary gland0 / 201550 
skin0 / 2105740 
spleen2 / 5395237
stomach0 / 966190 
testis17 / 33044251
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus2 / 2328788
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 205496_at
Cell line Expression level Expression bar
721_B_lymphoblasts10
Adipocyte10.15
AdrenalCortex15.15
Adrenalgland9.15
Amygdala10.35
Appendix13.35
AtrioventricularNode13.3
BDCA4+_DentriticCells9.55
Bonemarrow12.35
BronchialEpithelialCells9.5
CD105+_Endothelial9.7
CD14+_Monocytes11
CD19+_BCells(neg._sel.)10.2
CD33+_Myeloid12.85
CD34+11.1
CD4+_Tcells9.85
CD56+_NKCells12.15
CD71+_EarlyErythroid9.6
CD8+_Tcells9
CardiacMyocytes19.55
Caudatenucleus9.15
Cerebellum8.2
CerebellumPeduncles13.55
CiliaryGanglion9.75
CingulateCortex11.25
Colorectaladenocarcinoma9.95
DorsalRootGanglion9.65
FetalThyroid10.6
Fetalbrain17.35
Fetalliver9.2
Fetallung7.15
GlobusPallidus8.9
Heart22.35
Hypothalamus10.95
Kidney10.15
Leukemia_chronicMyelogenousK-5628.8
Leukemia_promyelocytic-HL-608.9
Leukemialymphoblastic(MOLT-4)8.25
Liver18.95
Lung11.3
Lymphnode8.45
Lymphoma_burkitts(Daudi)13.65
Lymphoma_burkitts(Raji)16.25
MedullaOblongata8.9
OccipitalLobe9.1
OlfactoryBulb7.8
Ovary8.95
Pancreas9.35
PancreaticIslet11.2
ParietalLobe12.25
Pituitary12.05
Placenta9.25
Pons10
PrefrontalCortex12.95
Prostate11.65
Salivarygland8.75
SkeletalMuscle18.75
Skin10
SmoothMuscle11.4
Spinalcord10.85
SubthalamicNucleus10.5
SuperiorCervicalGanglion19.2
TemporalLobe9.65
Testis8.65
TestisGermCell7.65
TestisIntersitial9.35
TestisLeydigCell10.65
TestisSeminiferousTubule8.65
Thalamus10.9
Thymus7.45
Thyroid10.95
Tongue14.2
Tonsil9.95
Trachea8.35
TrigeminalGanglion16.1
Uterus8.05
UterusCorpus12.1
WholeBlood10.75
Wholebrain8.3
colon9.95
pineal_day12.26
pineal_night11.78
retina12.25
small_intestine9.3
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_558_PI416573500
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala10.22 ± 0.29
Basal Forebrain9.79 ± 0.25
Basal Part of Pons10.24 ± 0.26
Cerebellar Cortex10.08 ± 0.18
Cerebellar Nuclei9.58 ± 0.41
Claustrum10.5 ± 0.42
Epithalamus9.14 ± 0.52
Frontal Lobe9.98 ± 0.41
Globus Pallidus9.4 ± 0.25
Hypothalamus9.55 ± 0.32
Insula9.99 ± 0.24
Limbic Lobe10.31 ± 0.32
Mesencephalon9.91 ± 0.31
Myelencephalon9.95 ± 0.38
Occipital Lobe10.43 ± 0.31
Parietal Lobe10.14 ± 0.32
Pontine Tegmentum9.91 ± 0.36
Striatum9.64 ± 0.37
Subthalamus9.82 ± 0.09
Temporal Lobe10.04 ± 0.31
Thalamus10.07 ± 0.24
White Matter9.41 ± 0.24
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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