AutismKB 2.0

Annotation Detail for LOC388242


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Basic Information Top
Gene Symbol:LOC388242 ( - )
Gene Full Name: -
Band: 16p11.2
Quick LinksEntrez ID:388242; OMIM: NA; Uniprot ID:; ENSEMBL ID: ; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Microarray in BioGPS Top
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_12342_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.01 ± 1.1
Basal Forebrain1.52 ± 0.3
Basal Part of Pons1.24 ± 0.77
Cerebellar Cortex1.38 ± 0.9
Cerebellar Nuclei1.94 ± 0.69
Claustrum2.52 ± 0.89
Epithalamus1.3 ± 0.73
Frontal Lobe1.49 ± 0.87
Globus Pallidus2.02 ± 0.4
Hypothalamus1.49 ± 0.76
Insula1.47 ± 0.98
Limbic Lobe1.48 ± 0.84
Mesencephalon1.71 ± 0.86
Myelencephalon1.55 ± 0.77
Occipital Lobe1.54 ± 0.91
Parietal Lobe1.52 ± 0.89
Pontine Tegmentum1.58 ± 0.92
Striatum1.57 ± 0.74
Subthalamus1.61 ± 1.06
Temporal Lobe1.51 ± 0.82
Thalamus1.39 ± 0.71
White Matter1.75 ± 0.3
Mouse Brain ISH
Peptide Top

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018