Annotation Detail for KRT85
Basic Information Top
Gene Symbol: | KRT85 ( HB5,Hb-5,KRTHB5,hHb5 ) |
---|---|
Gene Full Name: | keratin 85 |
Band: | 12q13.13 |
Quick Links | Entrez ID:3891; OMIM: 602767; Uniprot ID:KRT85_HUMAN; ENSEMBL ID: ENSG00000135443; HGNC ID: 6462 |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.182507
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
embryoid body | 0 / 70761 | 0 | |
blastocyst | 0 / 62319 | 0 | |
fetus | 6 / 564012 | 10 | |
neonate | 0 / 31097 | 0 | |
infant | 0 / 23620 | 0 | |
juvenile | 0 / 55556 | 0 | |
adult | 2 / 1939121 | 1 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 207670_at
Cell line | Expression level | Expression bar |
---|---|---|
721_B_lymphoblasts | 5.1 | |
Adipocyte | 4.25 | |
AdrenalCortex | 4.85 | |
Adrenalgland | 3.7 | |
Amygdala | 4.4 | |
Appendix | 4.65 | |
AtrioventricularNode | 3.45 | |
BDCA4+_DentriticCells | 4.5 | |
Bonemarrow | 4.4 | |
BronchialEpithelialCells | 4.2 | |
CD105+_Endothelial | 4.25 | |
CD14+_Monocytes | 4.55 | |
CD19+_BCells(neg._sel.) | 4.45 | |
CD33+_Myeloid | 5.4 | |
CD34+ | 5.25 | |
CD4+_Tcells | 4.45 | |
CD56+_NKCells | 5 | |
CD71+_EarlyErythroid | 4.05 | |
CD8+_Tcells | 4.05 | |
CardiacMyocytes | 6 | |
Caudatenucleus | 3.85 | |
Cerebellum | 3.5 | |
CerebellumPeduncles | 5 | |
CiliaryGanglion | 3.5 | |
CingulateCortex | 4.85 | |
Colorectaladenocarcinoma | 4.3 | |
DorsalRootGanglion | 3.7 | |
FetalThyroid | 4.35 | |
Fetalbrain | 4.2 | |
Fetalliver | 3.8 | |
Fetallung | 3.45 | |
GlobusPallidus | 3.25 | |
Heart | 5.85 | |
Hypothalamus | 4.6 | |
Kidney | 3.7 | |
Leukemia_chronicMyelogenousK-562 | 3.9 | |
Leukemia_promyelocytic-HL-60 | 3.75 | |
Leukemialymphoblastic(MOLT-4) | 3.55 | |
Liver | 5.95 | |
Lung | 4.7 | |
Lymphnode | 3.65 | |
Lymphoma_burkitts(Daudi) | 5.55 | |
Lymphoma_burkitts(Raji) | 6.2 | |
MedullaOblongata | 3.9 | |
OccipitalLobe | 3.85 | |
OlfactoryBulb | 3.35 | |
Ovary | 3.15 | |
Pancreas | 3.7 | |
PancreaticIslet | 4.65 | |
ParietalLobe | 4.7 | |
Pituitary | 5 | |
Placenta | 4.3 | |
Pons | 4.7 | |
PrefrontalCortex | 5.25 | |
Prostate | 4.95 | |
Salivarygland | 3.55 | |
SkeletalMuscle | 5.4 | |
Skin | 3.55 | |
SmoothMuscle | 4.85 | |
Spinalcord | 4.6 | |
SubthalamicNucleus | 4 | |
SuperiorCervicalGanglion | 5.3 | |
TemporalLobe | 4 | |
Testis | 3.7 | |
TestisGermCell | 3.5 | |
TestisIntersitial | 3.65 | |
TestisLeydigCell | 4.7 | |
TestisSeminiferousTubule | 3.75 | |
Thalamus | 5 | |
Thymus | 3.35 | |
Thyroid | 5.3 | |
Tongue | 4.4 | |
Tonsil | 4.25 | |
Trachea | 3.6 | |
TrigeminalGanglion | 5.15 | |
Uterus | 3.45 | |
UterusCorpus | 3.95 | |
WholeBlood | 4.6 | |
Wholebrain | 3.5 | |
colon | 4.35 | |
pineal_day | 5.28 | |
pineal_night | 5.2 | |
retina | 5.2 | |
small_intestine | 4.15 |
Human Whole Brain Microarrayview in Allen Brain Atlas
- Probe name: CUST_7509_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 3.2 ± 0.76 | |
Basal Forebrain | 2.68 ± 0.87 | |
Basal Part of Pons | 2.62 ± 0.93 | |
Cerebellar Cortex | 2.49 ± 0.86 | |
Cerebellar Nuclei | 2.76 ± 0.48 | |
Claustrum | 3.5 ± 0.77 | |
Epithalamus | 2.37 ± 0.68 | |
Frontal Lobe | 2.8 ± 0.93 | |
Globus Pallidus | 3.73 ± 0.73 | |
Hypothalamus | 2.53 ± 0.48 | |
Insula | 2.43 ± 0.65 | |
Limbic Lobe | 3.04 ± 0.99 | |
Mesencephalon | 2.98 ± 0.91 | |
Myelencephalon | 2.96 ± 0.93 | |
Occipital Lobe | 2.73 ± 1.01 | |
Parietal Lobe | 2.99 ± 0.94 | |
Pontine Tegmentum | 2.74 ± 0.7 | |
Striatum | 3.07 ± 0.91 | |
Subthalamus | 3.44 ± 0.47 | |
Temporal Lobe | 2.8 ± 0.87 | |
Thalamus | 2.79 ± 0.91 | |
White Matter | 2.83 ± 0.5 |
Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
---|---|---|---|---|---|
KRT85_HUMAN_133 | 9 | 133 | 141 | FAAFIDKVR | PRIDE |
KRT85_HUMAN_134 | 7 | 134 | 140 | FAAFIDK | PRIDE |
KRT85_HUMAN_192 | 17 | 192 | 208 | LASELNHVQEVLEGYKK | PRIDE |
KRT85_HUMAN_210 | 9 | 210 | 218 | KYEEEVALR | PRIDE |
KRT85_HUMAN_219 | 11 | 219 | 229 | ATAENEFVVLK | PRIDE |
KRT85_HUMAN_219 | 12 | 219 | 230 | ATAENEFVVLKK | PRIDE |
KRT85_HUMAN_265 | 14 | 265 | 278 | VLQAHISDTSVIVK | PRIDE |
KRT85_HUMAN_266 | 14 | 266 | 279 | VLQAHISDTSVIVK | PRIDE |
KRT85_HUMAN_306 | 10 | 306 | 315 | SRAEAESWYR | PRIDE |
KRT85_HUMAN_335 | 10 | 335 | 344 | TKEEINELNR | PRIDE |
KRT85_HUMAN_394 | 10 | 394 | 403 | AKQDMACLLK | PRIDE |
KRT85_HUMAN_395 | 10 | 395 | 404 | AKQDMACLLK | PRIDE |
KRT85_HUMAN_413 | 11 | 413 | 423 | LGLDIEIATYR | PRIDE |
PAp00044631 | 10 | 385 | 394 | LAELEGALQK | Peptide Atlas |