AutismKB 2.0

Annotation Detail for RBM12B


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Basic Information Top
Gene Symbol:RBM12B ( MGC:33837 )
Gene Full Name: RNA binding motif protein 12B
Band: 8q22.1
Quick LinksEntrez ID:389677; OMIM: NA; Uniprot ID:RB12B_HUMAN; ENSEMBL ID: ENSG00000183808; HGNC ID: 32310
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst7 / 62319112
fetus25 / 56401244
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult30 / 193912115
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor3 / 11424626
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor3 / 26384511
glioma0 / 1068830 
head and neck tumor2 / 13630214
kidney tumor0 / 689590 
leukemia2 / 9584220
liver tumor3 / 9635931
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia2 / 9725020
normal97 / 336030728
ovarian tumor1 / 7668213
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS3 / 12568023
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor7 / 9025777
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder1 / 2975733
blood3 / 12347824
bone1 / 7165513
bone marrow0 / 488010 
brain11 / 11009899
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue13 / 21572260
esophagus0 / 202090 
eye6 / 21105428
heart2 / 8962622
intestine5 / 23447221
kidney9 / 21177742
larynx0 / 241450 
liver8 / 20774338
lung18 / 33697453
lymph0 / 442700 
lymph node17 / 91610185
mammary gland0 / 1532710 
mouth1 / 6705214
muscle3 / 10771527
nerve0 / 157680 
ovary1 / 1020519
pancreas7 / 21481232
parathyroid1 / 2053948
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta2 / 2808257
prostate2 / 18934510
salivary gland0 / 201550 
skin3 / 21057414
spleen0 / 539520 
stomach0 / 966190 
testis5 / 33044215
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus9 / 23287838
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 51228_at
Cell line Expression level Expression bar
721_B_lymphoblasts20.6
Adipocyte15.3
AdrenalCortex21.9
Adrenalgland14.45
Amygdala15.9
Appendix29.95
AtrioventricularNode26.85
BDCA4+_DentriticCells12.2
Bonemarrow19.1
BronchialEpithelialCells15.2
CD105+_Endothelial17.8
CD14+_Monocytes19.7
CD19+_BCells(neg._sel.)15.85
CD33+_Myeloid19.95
CD34+21.35
CD4+_Tcells15.65
CD56+_NKCells15.8
CD71+_EarlyErythroid15.1
CD8+_Tcells15.3
CardiacMyocytes34.35
Caudatenucleus14
Cerebellum13.6
CerebellumPeduncles20.7
CiliaryGanglion18.65
CingulateCortex16.2
Colorectaladenocarcinoma15.45
DorsalRootGanglion20.85
FetalThyroid18.55
Fetalbrain14.95
Fetalliver14.5
Fetallung11.3
GlobusPallidus13.25
Heart29.75
Hypothalamus14.1
Kidney15.65
Leukemia_chronicMyelogenousK-56214.05
Leukemia_promyelocytic-HL-6014.6
Leukemialymphoblastic(MOLT-4)18.65
Liver28.5
Lung15.65
Lymphnode12.6
Lymphoma_burkitts(Daudi)21.25
Lymphoma_burkitts(Raji)25
MedullaOblongata12.2
OccipitalLobe14.05
OlfactoryBulb11.45
Ovary19.5
Pancreas14
PancreaticIslet16.9
ParietalLobe18.65
Pituitary20.3
Placenta16.55
Pons16.85
PrefrontalCortex16.4
Prostate22
Salivarygland13.9
SkeletalMuscle30
Skin19.95
SmoothMuscle17.35
Spinalcord17.15
SubthalamicNucleus16
SuperiorCervicalGanglion28.9
TemporalLobe15.75
Testis13.55
TestisGermCell12
TestisIntersitial15.9
TestisLeydigCell20.55
TestisSeminiferousTubule13.65
Thalamus16.7
Thymus12.3
Thyroid18.25
Tongue18.8
Tonsil16.5
Trachea12.8
TrigeminalGanglion27.65
Uterus17.05
UterusCorpus18.85
WholeBlood18.1
Wholebrain12.85
colon16.15
pineal_day22.46
pineal_night23.18
retina17.7
small_intestine16.8
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_8330_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.39 ± 0.5
Basal Forebrain5 ± 0.22
Basal Part of Pons5.06 ± 0.21
Cerebellar Cortex5.17 ± 0.29
Cerebellar Nuclei4.98 ± 0.45
Claustrum5.29 ± 0.61
Epithalamus5.21 ± 0.59
Frontal Lobe4.93 ± 0.44
Globus Pallidus5.45 ± 0.4
Hypothalamus5.15 ± 0.37
Insula4.97 ± 0.38
Limbic Lobe5.27 ± 0.47
Mesencephalon5.1 ± 0.44
Myelencephalon5.06 ± 0.49
Occipital Lobe5.39 ± 0.48
Parietal Lobe5.11 ± 0.48
Pontine Tegmentum5.08 ± 0.47
Striatum5.25 ± 0.4
Subthalamus5.33 ± 0.26
Temporal Lobe4.95 ± 0.38
Thalamus4.92 ± 0.41
White Matter5.8 ± 0.26
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00500202 21 94 114 GRPGSGTSGVDSLSNFIESVK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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