Annotation Detail for IER5L
Basic Information Top
| Gene Symbol: | IER5L ( MGC70833,bA247A12.2 ) |
|---|---|
| Gene Full Name: | immediate early response 5-like |
| Band: | 9q34.11 |
| Quick Links | Entrez ID:389792; OMIM: NA; Uniprot ID:IER5L_HUMAN; ENSEMBL ID: ENSG00000188483; HGNC ID: 23679 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.529857
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 7 / 70761 | 98 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 5 / 564012 | 8 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 63 / 1939121 | 32 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 7 / 82823 | 84 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 40 / 119369 | 335 |  |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 5 / 106883 | 46 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 51 / 3360307 | 15 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 3 / 125680 | 23 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 6 / 40015 | 149 | |
| bladder | 1 / 29757 | 33 | |
| blood | 0 / 123478 | 0 | |
| bone | 7 / 71655 | 97 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 9 / 1100989 | 8 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 12 / 215722 | 55 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 7 / 211054 | 33 | |
| heart | 0 / 89626 | 0 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 7 / 211777 | 33 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 7 / 336974 | 20 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 12 / 91610 | 130 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 4 / 102051 | 39 | |
| pancreas | 8 / 214812 | 37 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 6 / 280825 | 21 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 26 / 96619 | 269 | |
| testis | 2 / 330442 | 6 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_5171_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.38 ± 0.47 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.88 ± 0.52 | |
| Basal Part of Pons | 6.67 ± 0.46 | |
| Cerebellar Cortex | 5.97 ± 0.33 | |
| Cerebellar Nuclei | 6.3 ± 0.68 | |
| Claustrum | 6.46 ± 0.6 | |
| Epithalamus | 6.16 ± 0.19 | |
| Frontal Lobe | 6.55 ± 0.5 | |
| Globus Pallidus | 5.05 ± 0.65 | |
| Hypothalamus | 5.71 ± 0.67 | |
| Insula | 6.64 ± 0.29 | |
| Limbic Lobe | 6.19 ± 0.7 | |
| Mesencephalon | 6.06 ± 0.59 | |
| Myelencephalon | 6.14 ± 0.63 | |
| Occipital Lobe | 6.26 ± 0.56 | |
| Parietal Lobe | 6.56 ± 0.67 | |
| Pontine Tegmentum | 6.27 ± 0.51 | |
| Striatum | 6.05 ± 0.7 | |
| Subthalamus | 6.43 ± 0.22 | |
| Temporal Lobe | 6.43 ± 0.47 | |
| Thalamus | 6.12 ± 0.44 | |
| White Matter | 4.21 ± 0.17 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ier5l | CB | Cerebellum | 9.04 | |
| 10.45 | | |||
| Ier5l | CTX | Cerebral cortex | 57.85 | |
| 45.21 | | |||
| Ier5l | HIP | Hippocampal region | 14.71 | |
| 15.78 | | |||
| Ier5l | HPF | Hippocampal formation | 20.19 | |
| 18.4 | | |||
| Ier5l | HY | Hypothalamus | 2.53 | |
| 2.25 | | |||
| Ier5l | LSX | Lateral septal complex | 12.27 | |
| 8.43 | | |||
| Ier5l | MB | Midbrain | 9.97 | |
| 10.07 | | |||
| Ier5l | MY | Medulla | 14.1 | |
| 15.55 | | |||
| Ier5l | OLF | Olfactory bulb | 31.65 | |
| 25.28 | | |||
| Ier5l | P | Pons | 10.82 | |
| 11.45 | | |||
| Ier5l | PAL | Pallidum | 8.57 | |
| 7.79 | | |||
| Ier5l | RHP | Retrohippocampal region | 29.59 | |
| 22.38 | | |||
| Ier5l | sAMY | Striatum-like amygdalar nuclei | 9.74 | |
| 6.49 | | |||
| Ier5l | STR | Striatum | 17.5 | |
| 13.4 | | |||
| Ier5l | STRd | Striatum dorsal region | 16.67 | |
| 12.74 | | |||
| Ier5l | STRv | Striatum ventral region | 26.11 | |
| 19.85 | | |||
| Ier5l | TH | Thalamus | 11.22 | |
| 9.75 | |