Annotation Detail for HERC2P2
Basic Information Top
| Gene Symbol: | HERC2P2 ( D15F37S3,MN7 ) |
|---|---|
| Gene Full Name: | hect domain and RLD 2 pseudogene 2 |
| Band: | 15q11.2 |
| Quick Links | Entrez ID:400322; OMIM: NA; Uniprot ID:; ENSEMBL ID: ; HGNC ID: 4870 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.728176
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 3 / 62319 | 48 |  |
| fetus | 25 / 564012 | 44 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 113 / 1939121 | 58 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 6 / 82823 | 72 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 9 / 136302 | 66 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 7 / 103127 | 67 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 165 / 3360307 | 49 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 11 / 90257 | 121 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 3 / 33197 | 90 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 1 / 123478 | 8 |  |
| bone | 4 / 71655 | 55 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 63 / 1100989 | 57 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 5 / 149255 | 33 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 11 / 215722 | 50 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 8 / 211054 | 37 | |
| heart | 1 / 89626 | 11 | |
| intestine | 13 / 234472 | 55 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 3 / 24145 | 124 | |
| liver | 8 / 207743 | 38 | |
| lung | 26 / 336974 | 77 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 3 / 67052 | 44 | |
| muscle | 8 / 107715 | 74 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 10 / 214812 | 46 | |
| parathyroid | 4 / 20539 | 194 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 10 / 280825 | 35 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 7 / 210574 | 33 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 6 / 96619 | 62 | |
| testis | 11 / 330442 | 33 | |
| thymus | 7 / 81131 | 86 | |
| thyroid | 5 / 47473 | 105 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 18 / 232878 | 77 | |
| vascular | 3 / 51780 | 57 | |
- Probe name: A_23_P48973
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.52 ± 0.31 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.58 ± 0.25 | |
| Basal Part of Pons | 7.57 ± 0.27 | |
| Cerebellar Cortex | 7.73 ± 0.21 | |
| Cerebellar Nuclei | 7.91 ± 0.18 | |
| Claustrum | 7.92 ± 0.44 | |
| Epithalamus | 7.15 ± 0.52 | |
| Frontal Lobe | 7.5 ± 0.31 | |
| Globus Pallidus | 8 ± 0.22 | |
| Hypothalamus | 7.32 ± 0.29 | |
| Insula | 7.37 ± 0.34 | |
| Limbic Lobe | 7.52 ± 0.33 | |
| Mesencephalon | 7.55 ± 0.4 | |
| Myelencephalon | 7.6 ± 0.34 | |
| Occipital Lobe | 7.64 ± 0.35 | |
| Parietal Lobe | 7.57 ± 0.32 | |
| Pontine Tegmentum | 7.59 ± 0.34 | |
| Striatum | 7.6 ± 0.45 | |
| Subthalamus | 7.63 ± 0.12 | |
| Temporal Lobe | 7.55 ± 0.29 | |
| Thalamus | 7.65 ± 0.29 | |
| White Matter | 8.51 ± 0.16 | |
Mouse Brain ISH 