Annotation Detail for RGS7BP
Basic Information Top
| Gene Symbol: | RGS7BP ( R7BP ) |
|---|---|
| Gene Full Name: | regulator of G-protein signaling 7 binding protein |
| Band: | 5q12.3 |
| Quick Links | Entrez ID:401190; OMIM: 610890; Uniprot ID:R7BP_HUMAN; ENSEMBL ID: ENSG00000186479; HGNC ID: 23271 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.657133
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 4 / 564012 | 7 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 13 / 1939121 | 6 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 1 / 263845 | 3 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 1 / 68959 | 14 |  |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 92 / 3360307 | 27 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 |  |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 61 / 1100989 | 55 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 2 / 336974 | 5 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 2 / 330442 | 6 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: CUST_623_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 10.24 ± 0.52 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 10.1 ± 0.19 | |
| Basal Part of Pons | 10.18 ± 0.21 | |
| Cerebellar Cortex | 10 ± 0.22 | |
| Cerebellar Nuclei | 10.11 ± 0.68 | |
| Claustrum | 10.04 ± 0.39 | |
| Epithalamus | 8.69 ± 1.08 | |
| Frontal Lobe | 10.31 ± 0.47 | |
| Globus Pallidus | 8.98 ± 0.71 | |
| Hypothalamus | 9.22 ± 0.56 | |
| Insula | 10.31 ± 0.38 | |
| Limbic Lobe | 10.66 ± 0.49 | |
| Mesencephalon | 10.02 ± 0.63 | |
| Myelencephalon | 10.16 ± 0.59 | |
| Occipital Lobe | 10.38 ± 0.48 | |
| Parietal Lobe | 10.35 ± 0.41 | |
| Pontine Tegmentum | 10.39 ± 0.61 | |
| Striatum | 11.51 ± 0.54 | |
| Subthalamus | 10.12 ± 0.13 | |
| Temporal Lobe | 10.4 ± 0.33 | |
| Thalamus | 10.67 ± 0.46 | |
| White Matter | 7.59 ± 0.6 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| D13Bwg1146e | CB | Cerebellum | 29.56 | |
| 84.11 | | |||
| D13Bwg1146e | CTX | Cerebral cortex | 67.65 | |
| 65.57 | | |||
| D13Bwg1146e | HIP | Hippocampal region | 63.27 | |
| 74.26 | | |||
| D13Bwg1146e | HPF | Hippocampal formation | 59.85 | |
| 65.47 | | |||
| D13Bwg1146e | HY | Hypothalamus | 4.89 | |
| 4.68 | | |||
| D13Bwg1146e | LSX | Lateral septal complex | 14.68 | |
| 12.69 | | |||
| D13Bwg1146e | MB | Midbrain | 8.43 | |
| 9.17 | | |||
| D13Bwg1146e | MY | Medulla | 12.3 | |
| 16.33 | | |||
| D13Bwg1146e | OLF | Olfactory bulb | 42.84 | |
| 42.81 | | |||
| D13Bwg1146e | P | Pons | 9.93 | |
| 13.12 | | |||
| D13Bwg1146e | PAL | Pallidum | 19.46 | |
| 21.55 | | |||
| D13Bwg1146e | RHP | Retrohippocampal region | 56.51 | |
| 57.01 | | |||
| D13Bwg1146e | sAMY | Striatum-like amygdalar nuclei | 17.91 | |
| 15.54 | | |||
| D13Bwg1146e | STR | Striatum | 83.99 | |
| 80.57 | | |||
| D13Bwg1146e | STRd | Striatum dorsal region | 99.6 | |
| 95.42 | | |||
| D13Bwg1146e | STRv | Striatum ventral region | 65.76 | |
| 62.89 | | |||
| D13Bwg1146e | TH | Thalamus | 52.84 | |
| 61.13 | |