AutismKB 2.0

Annotation Detail for CYP4F3


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Basic Information Top
Gene Symbol:CYP4F3 ( CPF3,CYP4F,LTB4H )
Gene Full Name: cytochrome P450, family 4, subfamily F, polypeptide 3
Band: 19p13.12
Quick LinksEntrez ID:4051; OMIM: 601270; Uniprot ID:CP4F3_HUMAN; ENSEMBL ID: ENSG00000186529; HGNC ID: 2646
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus10 / 56401217
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult36 / 193912118
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor9 / 11424678
esophageal tumor4 / 17290231
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor13 / 13630295
kidney tumor0 / 689590 
leukemia10 / 95842104
liver tumor2 / 9635920
lung tumor2 / 10312719
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal40 / 336030711
ovarian tumor0 / 766820 
pancreatic tumor4 / 10461638
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood15 / 123478121
bone0 / 716550 
bone marrow1 / 4880120
brain12 / 110098910
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus4 / 20209197
eye0 / 2110540 
heart0 / 896260 
intestine10 / 23447242
kidney3 / 21177714
larynx2 / 2414582
liver8 / 20774338
lung2 / 3369745
lymph0 / 442700 
lymph node0 / 916100 
mammary gland2 / 15327113
mouth11 / 67052164
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas6 / 21481227
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta2 / 2808257
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen1 / 5395218
stomach0 / 966190 
testis0 / 3304420 
thymus2 / 8113124
thyroid0 / 474730 
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 206514_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts13.35
Adipocyte21.6
AdrenalCortex25.2
Adrenalgland20.2
Amygdala22.7
Appendix34.9
AtrioventricularNode22.45
BDCA4+_DentriticCells14.5
Bonemarrow31.05
BronchialEpithelialCells19.25
CD105+_Endothelial20.55
CD14+_Monocytes23.25
CD19+_BCells(neg._sel.)23.1
CD33+_Myeloid23.85
CD34+19.55
CD4+_Tcells13.95
CD56+_NKCells22.2
CD71+_EarlyErythroid20.55
CD8+_Tcells12.15
CardiacMyocytes58.8
Caudatenucleus19.65
Cerebellum17.65
CerebellumPeduncles34.6
CiliaryGanglion20
CingulateCortex25.5
Colorectaladenocarcinoma21.4
DorsalRootGanglion19.9
FetalThyroid24.15
Fetalbrain19.65
Fetalliver20.5
Fetallung17.75
GlobusPallidus17.8
Heart47.8
Hypothalamus21.4
Kidney29.25
Leukemia_chronicMyelogenousK-56219.8
Leukemia_promyelocytic-HL-6017.9
Leukemialymphoblastic(MOLT-4)13.15
Liver567.6
Lung23.75
Lymphnode16.95
Lymphoma_burkitts(Daudi)28.1
Lymphoma_burkitts(Raji)31.2
MedullaOblongata19.8
OccipitalLobe18.1
OlfactoryBulb16.6
Ovary17.9
Pancreas18.1
PancreaticIslet25.2
ParietalLobe23.45
Pituitary26.9
Placenta21.55
Pons23.3
PrefrontalCortex23.05
Prostate25.55
Salivarygland17.65
SkeletalMuscle26
Skin23
SmoothMuscle24.85
Spinalcord20.8
SubthalamicNucleus25.85
SuperiorCervicalGanglion52.2
TemporalLobe21.2
Testis18.7
TestisGermCell18
TestisIntersitial18.45
TestisLeydigCell24.35
TestisSeminiferousTubule18.7
Thalamus22.4
Thymus13.5
Thyroid23.4
Tongue35.7
Tonsil22.45
Trachea18.2
TrigeminalGanglion40.05
Uterus16.15
UterusCorpus21.25
WholeBlood30.15
Wholebrain18.25
colon21.9
pineal_day20.28
pineal_night20.32
retina23.3
small_intestine31.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Cyp4f18CBCerebellum3.51
4.79
Cyp4f18CTXCerebral cortex1.57
1.83
Cyp4f18HIPHippocampal region2
1.91
Cyp4f18HPFHippocampal formation1.87
1.68
Cyp4f18HYHypothalamus0.26
0.19
Cyp4f18LSXLateral septal complex0.64
0.4
Cyp4f18MBMidbrain2.66
2.87
Cyp4f18MYMedulla4.78
5.03
Cyp4f18OLFOlfactory bulb4.13
4.72
Cyp4f18PPons3.87
4.01
Cyp4f18PALPallidum0.49
0.37
Cyp4f18RHPRetrohippocampal region1.63
1.37
Cyp4f18sAMYStriatum-like amygdalar nuclei0.25
0.25
Cyp4f18STRStriatum0.45
0.37
Cyp4f18STRdStriatum dorsal region0.38
0.35
Cyp4f18STRvStriatum ventral region0.68
0.43
Cyp4f18THThalamus0.65
0.64
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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