AutismKB 2.0

Annotation Detail for TACSTD2


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Basic Information Top
Gene Symbol:TACSTD2 ( EGP-1,EGP1,GA733-1,GA7331,GP50,M1S1,TROP2 )
Gene Full Name: tumor-associated calcium signal transducer 2
Band: 1p32.1
Quick LinksEntrez ID:4070; OMIM: 137290; Uniprot ID:TACD2_HUMAN; ENSEMBL ID: ENSG00000184292; HGNC ID: 11530
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst0 / 623190 
fetus25 / 56401244
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult167 / 193912186
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor6 / 9417863
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor1 / 1142468
esophageal tumor1 / 1729057
gastrointestinal tumor5 / 11936941
germ cell tumor1 / 2638453
glioma1 / 1068839
head and neck tumor16 / 136302117
kidney tumor0 / 689590 
leukemia2 / 9584220
liver tumor0 / 963590 
lung tumor12 / 103127116
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal150 / 336030744
ovarian tumor33 / 76682430
pancreatic tumor15 / 104616143
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer15 / 102680146
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor13 / 90257144
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland0 / 331970 
ascites3 / 4001574
bladder5 / 29757168
blood0 / 1234780 
bone5 / 7165569
bone marrow2 / 4880140
brain3 / 11009892
cervix1 / 4817120
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue7 / 21572232
esophagus1 / 2020949
eye5 / 21105423
heart17 / 89626189
intestine13 / 23447255
kidney15 / 21177770
larynx6 / 24145248
liver1 / 2077434
lung31 / 33697491
lymph0 / 442700 
lymph node1 / 9161010
mammary gland24 / 153271156
mouth7 / 67052104
muscle1 / 1077159
nerve0 / 157680 
ovary33 / 102051323
pancreas26 / 214812121
parathyroid0 / 205390 
pharynx7 / 41328169
pituitary gland0 / 165850 
placenta11 / 28082539
prostate33 / 189345174
salivary gland0 / 201550 
skin7 / 21057433
spleen0 / 539520 
stomach3 / 9661931
testis0 / 3304420 
thymus0 / 811310 
thyroid4 / 4747384
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus26 / 232878111
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 202286_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts4.9
Adipocyte3.95
AdrenalCortex4.35
Adrenalgland3.4
Amygdala4.15
Appendix4.35
AtrioventricularNode3.35
BDCA4+_DentriticCells4.35
Bonemarrow15.25
BronchialEpithelialCells3494.05
CD105+_Endothelial4.05
CD14+_Monocytes4.25
CD19+_BCells(neg._sel.)4.25
CD33+_Myeloid8.7
CD34+5.1
CD4+_Tcells4.3
CD56+_NKCells4.75
CD71+_EarlyErythroid3.8
CD8+_Tcells3.8
CardiacMyocytes5.3
Caudatenucleus3.6
Cerebellum3.25
CerebellumPeduncles4.55
CiliaryGanglion2.9
CingulateCortex4.1
Colorectaladenocarcinoma1038.3
DorsalRootGanglion3.15
FetalThyroid3.9
Fetalbrain3.95
Fetalliver3.5
Fetallung308.8
GlobusPallidus2.95
Heart5.25
Hypothalamus4.35
Kidney193.15
Leukemia_chronicMyelogenousK-5623.6
Leukemia_promyelocytic-HL-603.55
Leukemialymphoblastic(MOLT-4)3.2
Liver5.45
Lung1457.85
Lymphnode3.4
Lymphoma_burkitts(Daudi)5.15
Lymphoma_burkitts(Raji)5.7
MedullaOblongata3.65
OccipitalLobe3.6
OlfactoryBulb18.65
Ovary2.7
Pancreas263.6
PancreaticIslet771
ParietalLobe4.3
Pituitary4.65
Placenta200.45
Pons3.8
PrefrontalCortex4.95
Prostate2715.65
Salivarygland1098.5
SkeletalMuscle4.85
Skin1011.35
SmoothMuscle4.55
Spinalcord4.3
SubthalamicNucleus3.7
SuperiorCervicalGanglion4.65
TemporalLobe3.65
Testis3.45
TestisGermCell3.35
TestisIntersitial3.35
TestisLeydigCell4.25
TestisSeminiferousTubule3.4
Thalamus4.1
Thymus7
Thyroid5.2
Tongue2046.7
Tonsil1481.4
Trachea1101.45
TrigeminalGanglion4.1
Uterus3.4
UterusCorpus3.6
WholeBlood4.4
Wholebrain3.35
colon4.05
pineal_day4.96
pineal_night4.88
retina4.825
small_intestine3.85
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_10163_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.08 ± 0.63
Basal Forebrain4.06 ± 0.29
Basal Part of Pons3.6 ± 0.61
Cerebellar Cortex3.63 ± 0.52
Cerebellar Nuclei3.91 ± 0.62
Claustrum4.48 ± 1.05
Epithalamus3.33 ± 0.44
Frontal Lobe3.74 ± 0.65
Globus Pallidus4.46 ± 0.61
Hypothalamus3.37 ± 0.58
Insula3.73 ± 0.48
Limbic Lobe4.06 ± 0.73
Mesencephalon3.87 ± 0.78
Myelencephalon3.9 ± 0.74
Occipital Lobe3.97 ± 0.67
Parietal Lobe3.69 ± 0.81
Pontine Tegmentum3.72 ± 0.62
Striatum4.06 ± 0.73
Subthalamus3.58 ± 0.08
Temporal Lobe3.77 ± 0.66
Thalamus3.89 ± 0.72
White Matter4.26 ± 0.38
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Tacstd2CBCerebellum28.79
42.78
Tacstd2CTXCerebral cortex28.85
22.36
Tacstd2HIPHippocampal region18.26
22.45
Tacstd2HPFHippocampal formation21.89
22.25
Tacstd2HYHypothalamus13.83
10.09
Tacstd2LSXLateral septal complex20.28
13.59
Tacstd2MBMidbrain18.83
17.35
Tacstd2MYMedulla18.82
20.26
Tacstd2OLFOlfactory bulb31.26
24.71
Tacstd2PPons18.84
18.67
Tacstd2PALPallidum11.7
9.26
Tacstd2RHPRetrohippocampal region28.03
22.47
Tacstd2sAMYStriatum-like amygdalar nuclei17.7
13.7
Tacstd2STRStriatum13.48
10.2
Tacstd2STRdStriatum dorsal region12.9
10.36
Tacstd2STRvStriatum ventral region10.93
7.09
Tacstd2THThalamus22.53
17.29
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00009276 16 57 72 ALGSGMAVDCSTLTSK Peptide Atlas
TACD2_HUMAN_87 26 87 112 TLVRPSEHALVDNDGLYDPDCDPEGR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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