AutismKB 2.0

Annotation Detail for NOMO3


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Basic Information Top
Gene Symbol:NOMO3 ( Nomo )
Gene Full Name: NODAL modulator 3
Band: 16p13.11
Quick LinksEntrez ID:408050; OMIM: 609159; Uniprot ID:NOMO3_HUMAN; ENSEMBL ID: ENSG00000103226; HGNC ID: 25242
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body9 / 70761127
blastocyst7 / 62319112
fetus38 / 56401267
neonate3 / 3109796
infant0 / 236200 
juvenile5 / 5555689
adult224 / 1939121115
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor9 / 9417895
cervical tumor3 / 3436687
chondrosarcoma20 / 82823241
colorectal tumor20 / 114246175
esophageal tumor1 / 1729057
gastrointestinal tumor12 / 119369100
germ cell tumor31 / 263845117
glioma10 / 10688393
head and neck tumor6 / 13630244
kidney tumor8 / 68959116
leukemia6 / 9584262
liver tumor6 / 9635962
lung tumor8 / 10312777
lymphoma3 / 7175541
non-neoplasia6 / 9725061
normal239 / 336030771
ovarian tumor5 / 7668265
pancreatic tumor31 / 104616296
primitive neuroectodermal tumor of the CNS18 / 125680143
prostate cancer7 / 10268068
retinoblastoma5 / 46356107
skin tumor9 / 12494972
soft tissue/muscle tissue tumor6 / 12519147
uterine tumor13 / 90257144
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites4 / 4001599
bladder0 / 297570 
blood10 / 12347880
bone8 / 71655111
bone marrow3 / 4880161
brain82 / 110098974
cervix5 / 48171103
connective tissue15 / 149255100
ear1 / 1621261
embryonic tissue19 / 21572288
esophagus1 / 2020949
eye28 / 211054132
heart4 / 8962644
intestine28 / 234472119
kidney16 / 21177775
larynx0 / 241450 
liver9 / 20774343
lung38 / 336974112
lymph1 / 4427022
lymph node5 / 9161054
mammary gland16 / 153271104
mouth3 / 6705244
muscle2 / 10771518
nerve1 / 1576863
ovary7 / 10205168
pancreas32 / 214812148
parathyroid8 / 20539389
pharynx0 / 413280 
pituitary gland3 / 16585180
placenta24 / 28082585
prostate10 / 18934552
salivary gland0 / 201550 
skin15 / 21057471
spleen2 / 5395237
stomach8 / 9661982
testis48 / 330442145
thymus1 / 8113112
thyroid4 / 4747384
tonsil0 / 169990 
trachea4 / 5241376
umbilical cord5 / 13680365
uterus21 / 23287890
vascular5 / 5178096
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 221853_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts159.1
Adipocyte149.6
AdrenalCortex79.8
Adrenalgland113.1
Amygdala249.25
Appendix33.1
AtrioventricularNode24.3
BDCA4+_DentriticCells437.8
Bonemarrow84.85
BronchialEpithelialCells352.45
CD105+_Endothelial46.15
CD14+_Monocytes87.15
CD19+_BCells(neg._sel.)74.15
CD33+_Myeloid310.45
CD34+215.2
CD4+_Tcells137.25
CD56+_NKCells202.45
CD71+_EarlyErythroid56.4
CD8+_Tcells122.8
CardiacMyocytes225.4
Caudatenucleus242.35
Cerebellum298.25
CerebellumPeduncles413.15
CiliaryGanglion20.95
CingulateCortex286.35
Colorectaladenocarcinoma248.9
DorsalRootGanglion29.8
FetalThyroid101.5
Fetalbrain118.95
Fetalliver38.35
Fetallung138.4
GlobusPallidus152.8
Heart200.65
Hypothalamus391.5
Kidney121.9
Leukemia_chronicMyelogenousK-562155.45
Leukemia_promyelocytic-HL-6077.35
Leukemialymphoblastic(MOLT-4)56.95
Liver330.1
Lung126.65
Lymphnode94.85
Lymphoma_burkitts(Daudi)171.15
Lymphoma_burkitts(Raji)95.75
MedullaOblongata229.8
OccipitalLobe315.4
OlfactoryBulb97.35
Ovary38
Pancreas211.3
PancreaticIslet326.35
ParietalLobe307.45
Pituitary199.4
Placenta431.95
Pons165.1
PrefrontalCortex496.15
Prostate181.85
Salivarygland59.2
SkeletalMuscle62.15
Skin18.7
SmoothMuscle322.1
Spinalcord157.25
SubthalamicNucleus217.2
SuperiorCervicalGanglion44.95
TemporalLobe234.5
Testis132.5
TestisGermCell127.7
TestisIntersitial121.05
TestisLeydigCell86.6
TestisSeminiferousTubule97.45
Thalamus361.6
Thymus92.2
Thyroid169.95
Tongue62.1
Tonsil65.85
Trachea121.1
TrigeminalGanglion19.9
Uterus98.05
UterusCorpus58.75
WholeBlood145
Wholebrain499.2
colon101.35
pineal_day568.76
pineal_night533.98
retina219.725
small_intestine138.05
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
NOMO3_HUMAN_1140 10 1140 1149 HFTLIFNPTR PRIDE
NOMO3_HUMAN_119 16 119 134 GGDINFVFTGFSVNGK PRIDE
NOMO3_HUMAN_153 18 153 170 NTGTEAKIQSTVTQPGGK PRIDE
NOMO3_HUMAN_160 11 160 170 IQSTVTQPGGK PRIDE
NOMO3_HUMAN_171 5 171 175 FAFFK PRIDE
NOMO3_HUMAN_176 18 176 193 VLPGDYEILATHPTWALK PRIDE
NOMO3_HUMAN_194 7 194 200 EASTTVR PRIDE
NOMO3_HUMAN_300 9 300 308 ITFDVAPSR PRIDE
NOMO3_HUMAN_320 15 320 334 IEPVFHVMGFSVTGR PRIDE
NOMO3_HUMAN_367 15 367 381 LENITTGTYTIHAQK PRIDE
NOMO3_HUMAN_509 19 509 527 VSCLDTCGDLLVTLQSLSR PRIDE
NOMO3_HUMAN_557 11 557 567 ISIMHEDWCWK PRIDE
NOMO3_HUMAN_570 17 570 586 SLEVEVLEDDVSAVEFR PRIDE
NOMO3_HUMAN_67 19 67 85 YQTDCAPNNGYFMIPLYDK PRIDE
NOMO3_HUMAN_701 6 701 706 SVQELR PRIDE
NOMO3_HUMAN_759 12 759 770 SGEKITVTPSSK PRIDE
NOMO3_HUMAN_86 6 86 91 GDFILK PRIDE
NOMO3_HUMAN_935 17 935 951 FEPSSQMIEVQEGQNLK PRIDE
PAp00000281 20 884 903 AEDDQPLPGVLLSLSGGLFR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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