Annotation Detail for MAGEA3
Basic Information Top
| Gene Symbol: | MAGEA3 ( CT1.3,HIP8,HYPD,MAGE3,MAGEA6,MGC14613 ) |
|---|---|
| Gene Full Name: | melanoma antigen family A, 3 |
| Band: | Xq28 |
| Quick Links | Entrez ID:4102; OMIM: 300174; Uniprot ID:MAGA3_HUMAN; ENSEMBL ID: ENSG00000221867; HGNC ID: 6801 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.417816
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 1 / 564012 | 1 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 27 / 1939121 | 13 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 |  |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 6 / 94178 | 63 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 12 / 263845 | 45 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 1 / 136302 | 7 |  |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 5 / 3360307 | 1 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 9 / 102680 | 87 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 17 / 124949 | 136 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 2 / 1100989 | 1 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 1 / 24145 | 41 | |
| liver | 1 / 207743 | 4 | |
| lung | 5 / 336974 | 14 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 6 / 153271 | 39 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 12 / 280825 | 42 | |
| prostate | 9 / 189345 | 47 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 18 / 210574 | 85 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 3 / 330442 | 9 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 209942_x_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 1205.05 |  |
| Adipocyte | 4.35 | |
| AdrenalCortex | 4.75 | |
| Adrenalgland | 3.75 | |
| Amygdala | 4.55 | |
| Appendix | 16.55 | |
| AtrioventricularNode | 4.15 | |
| BDCA4+_DentriticCells | 4.55 | |
| Bonemarrow | 4.4 | |
| BronchialEpithelialCells | 4.3 | |
| CD105+_Endothelial | 4.35 | |
| CD14+_Monocytes | 4.65 | |
| CD19+_BCells(neg._sel.) | 4.7 | |
| CD33+_Myeloid | 5.5 | |
| CD34+ | 5.5 | |
| CD4+_Tcells | 4.75 | |
| CD56+_NKCells | 5.2 | |
| CD71+_EarlyErythroid | 4.1 | |
| CD8+_Tcells | 4.15 | |
| CardiacMyocytes | 5.85 | |
| Caudatenucleus | 3.9 | |
| Cerebellum | 3.55 | |
| CerebellumPeduncles | 4.95 | |
| CiliaryGanglion | 3.45 | |
| CingulateCortex | 4.5 | |
| Colorectaladenocarcinoma | 4.35 | |
| DorsalRootGanglion | 3.55 | |
| FetalThyroid | 4.2 | |
| Fetalbrain | 4.3 | |
| Fetalliver | 3.85 | |
| Fetallung | 3.55 | |
| GlobusPallidus | 3.25 | |
| Heart | 5.75 | |
| Hypothalamus | 4.75 | |
| Kidney | 3.55 | |
| Leukemia_chronicMyelogenousK-562 | 625.8 |  |
| Leukemia_promyelocytic-HL-60 | 3.85 | |
| Leukemialymphoblastic(MOLT-4) | 3.45 | |
| Liver | 5.9 | |
| Lung | 4.8 | |
| Lymphnode | 3.75 | |
| Lymphoma_burkitts(Daudi) | 5.55 | |
| Lymphoma_burkitts(Raji) | 6.15 | |
| MedullaOblongata | 4 | |
| OccipitalLobe | 3.85 | |
| OlfactoryBulb | 3.45 | |
| Ovary | 2.95 | |
| Pancreas | 3.6 | |
| PancreaticIslet | 4.65 | |
| ParietalLobe | 4.65 | |
| Pituitary | 5.1 | |
| Placenta | 4.45 | |
| Pons | 4.15 | |
| PrefrontalCortex | 5.4 | |
| Prostate | 5.05 | |
| Salivarygland | 4.35 | |
| SkeletalMuscle | 5.4 | |
| Skin | 3.55 | |
| SmoothMuscle | 4.9 | |
| Spinalcord | 4.65 | |
| SubthalamicNucleus | 4 | |
| SuperiorCervicalGanglion | 7.1 | |
| TemporalLobe | 4.2 | |
| Testis | 74.55 | |
| TestisGermCell | 15.45 | |
| TestisIntersitial | 11.7 | |
| TestisLeydigCell | 7.55 | |
| TestisSeminiferousTubule | 9.35 | |
| Thalamus | 4.45 | |
| Thymus | 3.35 | |
| Thyroid | 5.45 | |
| Tongue | 4.6 | |
| Tonsil | 4.2 | |
| Trachea | 3.65 | |
| TrigeminalGanglion | 7.45 | |
| Uterus | 3.55 | |
| UterusCorpus | 3.95 | |
| WholeBlood | 4.75 | |
| Wholebrain | 3.7 | |
| colon | 4.45 | |
| pineal_day | 5.4 | |
| pineal_night | 5.3 | |
| retina | 5.275 | |
| small_intestine | 4.2 | |
Mouse Brain ISH 
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00493395 | 8 | 269 | 276 | YEFLWGPR | Peptide Atlas |