Annotation Detail for MAP6
Basic Information Top
| Gene Symbol: | MAP6 ( FLJ41346,KIAA1878,MTAP6,N-STOP,STOP ) |
|---|---|
| Gene Full Name: | microtubule-associated protein 6 |
| Band: | 11q13.5 |
| Quick Links | Entrez ID:4135; OMIM: 601783; Uniprot ID:MAP6_HUMAN; ENSEMBL ID: ENSG00000171533; HGNC ID: 6868 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.585540
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 49 / 564012 | 86 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 |  |
| juvenile | 2 / 55556 | 35 | |
| adult | 42 / 1939121 | 21 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 11 / 106883 | 102 | |
| head and neck tumor | 1 / 136302 | 7 |  |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 118 / 3360307 | 35 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 86 / 1100989 | 78 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 14 / 211054 | 66 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 8 / 336974 | 23 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 3 / 16585 | 180 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 10 / 330442 | 30 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P47728
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.99 ± 0.56 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.22 ± 0.33 | |
| Basal Part of Pons | 8.93 ± 0.4 | |
| Cerebellar Cortex | 8.04 ± 0.24 | |
| Cerebellar Nuclei | 8.28 ± 0.33 | |
| Claustrum | 7.87 ± 0.5 | |
| Epithalamus | 9.16 ± 0.61 | |
| Frontal Lobe | 8.49 ± 0.41 | |
| Globus Pallidus | 7.39 ± 0.55 | |
| Hypothalamus | 8.7 ± 0.34 | |
| Insula | 8.61 ± 0.26 | |
| Limbic Lobe | 8.19 ± 0.57 | |
| Mesencephalon | 8.05 ± 0.41 | |
| Myelencephalon | 8.2 ± 0.64 | |
| Occipital Lobe | 7.86 ± 0.49 | |
| Parietal Lobe | 8.23 ± 0.49 | |
| Pontine Tegmentum | 8.23 ± 0.45 | |
| Striatum | 8.09 ± 0.62 | |
| Subthalamus | 8.68 ± 0.38 | |
| Temporal Lobe | 8.47 ± 0.44 | |
| Thalamus | 8.08 ± 0.43 | |
| White Matter | 6.33 ± 0.33 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Mtap6 | CB | Cerebellum | 37.44 | |
| 80.37 | | |||
| Mtap6 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Mtap6 | HIP | Hippocampal region | 53.19 | |
| 95.78 | | |||
| Mtap6 | HPF | Hippocampal formation | 84.19 | |
| 100 | | |||
| Mtap6 | HY | Hypothalamus | 86.32 | |
| 89.14 | | |||
| Mtap6 | LSX | Lateral septal complex | 100 | |
| 100 | | |||
| Mtap6 | MB | Midbrain | 92.92 | |
| 100 | | |||
| Mtap6 | MY | Medulla | 87.14 | |
| 100 | | |||
| Mtap6 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Mtap6 | P | Pons | 80.07 | |
| 100 | | |||
| Mtap6 | PAL | Pallidum | 82.8 | |
| 99.94 | | |||
| Mtap6 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Mtap6 | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Mtap6 | STR | Striatum | 69.84 | |
| 63.33 | | |||
| Mtap6 | STRd | Striatum dorsal region | 57.26 | |
| 52.63 | | |||
| Mtap6 | STRv | Striatum ventral region | 69.33 | |
| 57.41 | | |||
| Mtap6 | TH | Thalamus | 100 | |
| 100 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00080849 | 11 | 130 | 140 | VQRPEPSCRPR | Peptide Atlas |