Annotation Detail for TBC1D3B
Basic Information Top
| Gene Symbol: | TBC1D3B ( FLJ78399,PRC17,TBC1D3I ) |
|---|---|
| Gene Full Name: | TBC1 domain family, member 3B |
| Band: | 17q12 |
| Quick Links | Entrez ID:414059; OMIM: 610144; Uniprot ID:TBC3A_HUMAN; ENSEMBL ID: ENSG00000224226; HGNC ID: 27011 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.454713
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 1 / 564012 | 1 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 17 / 1939121 | 8 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 19 / 3360307 | 5 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 6 / 1100989 | 5 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 1 / 211054 | 4 | |
| heart | 1 / 89626 | 11 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 1 / 336974 | 2 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 13 / 330442 | 39 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 209403_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 85.5 |  |
| Adipocyte | 22.9 | |
| AdrenalCortex | 85.2 | |
| Adrenalgland | 32.9 | |
| Amygdala | 54.9 | |
| Appendix | 22.35 | |
| AtrioventricularNode | 20.85 | |
| BDCA4+_DentriticCells | 40.1 | |
| Bonemarrow | 31 | |
| BronchialEpithelialCells | 18.3 | |
| CD105+_Endothelial | 8.15 | |
| CD14+_Monocytes | 48.55 | |
| CD19+_BCells(neg._sel.) | 76.6 | |
| CD33+_Myeloid | 48.1 | |
| CD34+ | 73.55 | |
| CD4+_Tcells | 197.95 | |
| CD56+_NKCells | 49.5 | |
| CD71+_EarlyErythroid | 10.05 | |
| CD8+_Tcells | 181.8 | |
| CardiacMyocytes | 40.95 | |
| Caudatenucleus | 37.7 | |
| Cerebellum | 32.45 | |
| CerebellumPeduncles | 51.05 | |
| CiliaryGanglion | 12.25 | |
| CingulateCortex | 110.2 | |
| Colorectaladenocarcinoma | 60.7 | |
| DorsalRootGanglion | 13.65 | |
| FetalThyroid | 41.1 | |
| Fetalbrain | 153.1 | |
| Fetalliver | 14.8 | |
| Fetallung | 47.3 | |
| GlobusPallidus | 39.4 | |
| Heart | 14.25 | |
| Hypothalamus | 70.75 | |
| Kidney | 26.1 | |
| Leukemia_chronicMyelogenousK-562 | 116.7 | |
| Leukemia_promyelocytic-HL-60 | 25.85 | |
| Leukemialymphoblastic(MOLT-4) | 40.6 | |
| Liver | 29.9 | |
| Lung | 38.1 | |
| Lymphnode | 82.95 | |
| Lymphoma_burkitts(Daudi) | 45.6 | |
| Lymphoma_burkitts(Raji) | 167.2 | |
| MedullaOblongata | 39.6 | |
| OccipitalLobe | 40.95 | |
| OlfactoryBulb | 29.85 | |
| Ovary | 28.1 | |
| Pancreas | 31.3 | |
| PancreaticIslet | 34.7 | |
| ParietalLobe | 38.2 | |
| Pituitary | 43.75 | |
| Placenta | 15.7 | |
| Pons | 37.1 | |
| PrefrontalCortex | 111.65 | |
| Prostate | 107.9 | |
| Salivarygland | 52.75 | |
| SkeletalMuscle | 58.35 | |
| Skin | 32.85 | |
| SmoothMuscle | 17.5 | |
| Spinalcord | 44.5 | |
| SubthalamicNucleus | 36.45 | |
| SuperiorCervicalGanglion | 31.8 | |
| TemporalLobe | 25.75 | |
| Testis | 498.2 |  |
| TestisGermCell | 255.05 | |
| TestisIntersitial | 970.75 | |
| TestisLeydigCell | 609.5 | |
| TestisSeminiferousTubule | 433.25 | |
| Thalamus | 60.3 | |
| Thymus | 53 | |
| Thyroid | 33.2 | |
| Tongue | 103.4 | |
| Tonsil | 58.15 | |
| Trachea | 32.7 | |
| TrigeminalGanglion | 42.7 | |
| Uterus | 57.5 | |
| UterusCorpus | 33.55 | |
| WholeBlood | 40.8 | |
| Wholebrain | 24.5 | |
| colon | 40.1 | |
| pineal_day | 462.06 | |
| pineal_night | 312.52 | |
| retina | 75.1 | |
| small_intestine | 32.75 | |
Mouse Brain ISH 