AutismKB 2.0

Annotation Detail for PIM3


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Basic Information Top
Gene Symbol:PIM3 ( pim-3 )
Gene Full Name: pim-3 oncogene
Band: 22q13.33
Quick LinksEntrez ID:415116; OMIM: 610580; Uniprot ID:PIM3_HUMAN; ENSEMBL ID: ENSG00000198355; HGNC ID: 19310
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body4 / 7076156
blastocyst1 / 6231916
fetus10 / 56401217
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult103 / 193912153
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor3 / 9417831
cervical tumor0 / 343660 
chondrosarcoma8 / 8282396
colorectal tumor7 / 11424661
esophageal tumor1 / 1729057
gastrointestinal tumor3 / 11936925
germ cell tumor7 / 26384526
glioma13 / 106883121
head and neck tumor1 / 1363027
kidney tumor2 / 6895929
leukemia0 / 958420 
liver tumor3 / 9635931
lung tumor7 / 10312767
lymphoma9 / 71755125
non-neoplasia7 / 9725071
normal146 / 336030743
ovarian tumor5 / 7668265
pancreatic tumor12 / 104616114
primitive neuroectodermal tumor of the CNS8 / 12568063
prostate cancer3 / 10268029
retinoblastoma7 / 46356151
skin tumor9 / 12494972
soft tissue/muscle tissue tumor8 / 12519163
uterine tumor17 / 90257188
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland0 / 331970 
ascites0 / 400150 
bladder1 / 2975733
blood5 / 12347840
bone4 / 7165555
bone marrow0 / 488010 
brain31 / 110098928
cervix0 / 481710 
connective tissue8 / 14925553
ear0 / 162120 
embryonic tissue6 / 21572227
esophagus1 / 2020949
eye19 / 21105490
heart2 / 8962622
intestine12 / 23447251
kidney7 / 21177733
larynx0 / 241450 
liver4 / 20774319
lung23 / 33697468
lymph6 / 44270135
lymph node7 / 9161076
mammary gland3 / 15327119
mouth0 / 670520 
muscle2 / 10771518
nerve1 / 1576863
ovary8 / 10205178
pancreas27 / 214812125
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta18 / 28082564
prostate4 / 18934521
salivary gland1 / 2015549
skin15 / 21057471
spleen1 / 5395218
stomach12 / 96619124
testis17 / 33044251
thymus1 / 8113112
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord2 / 13680146
uterus25 / 232878107
vascular0 / 517800 
Microarray in BioGPS Top
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_16521_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.91 ± 1.12
Basal Forebrain2.28 ± 0.27
Basal Part of Pons2.25 ± 0.51
Cerebellar Cortex2.65 ± 0.65
Cerebellar Nuclei2.76 ± 0.73
Claustrum3.21 ± 0.78
Epithalamus2.21 ± 0.6
Frontal Lobe2.63 ± 0.76
Globus Pallidus2.56 ± 0.65
Hypothalamus2.45 ± 0.57
Insula2.26 ± 0.63
Limbic Lobe2.47 ± 0.74
Mesencephalon2.68 ± 0.88
Myelencephalon2.63 ± 0.67
Occipital Lobe2.36 ± 0.65
Parietal Lobe2.39 ± 0.72
Pontine Tegmentum2.58 ± 0.71
Striatum2.53 ± 0.88
Subthalamus2.58 ± 0.7
Temporal Lobe2.49 ± 0.78
Thalamus2.53 ± 0.63
White Matter2.6 ± 0.12
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018