Annotation Detail for MET
Basic Information Top
Gene Symbol: | MET ( AUTS9,HGFR,RCCP2,c-Met ) |
---|---|
Gene Full Name: | met proto-oncogene (hepatocyte growth factor receptor) |
Band: | 7q31 |
Quick Links | Entrez ID:4233; OMIM: 164860; Uniprot ID:MET_HUMAN; ENSEMBL ID: ENSG00000105976; HGNC ID: 7029 |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.132966
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
embryoid body | 1 / 70761 | 14 | |
blastocyst | 0 / 62319 | 0 | |
fetus | 57 / 564012 | 101 | |
neonate | 0 / 31097 | 0 | |
infant | 0 / 23620 | 0 | |
juvenile | 4 / 55556 | 71 | |
adult | 109 / 1939121 | 56 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
adrenal tumor | 0 / 12794 | 0 | |
bladder carcinoma | 1 / 17475 | 57 | |
breast (mammary gland) tumor | 2 / 94178 | 21 | |
cervical tumor | 2 / 34366 | 58 | |
chondrosarcoma | 9 / 82823 | 108 | |
colorectal tumor | 23 / 114246 | 201 | |
esophageal tumor | 5 / 17290 | 289 | |
gastrointestinal tumor | 22 / 119369 | 184 | |
germ cell tumor | 4 / 263845 | 15 | |
glioma | 2 / 106883 | 18 | |
head and neck tumor | 11 / 136302 | 80 | |
kidney tumor | 3 / 68959 | 43 | |
leukemia | 1 / 95842 | 10 | |
liver tumor | 12 / 96359 | 124 | |
lung tumor | 9 / 103127 | 87 | |
lymphoma | 0 / 71755 | 0 | |
non-neoplasia | 2 / 97250 | 20 | |
normal | 162 / 3360307 | 48 | |
ovarian tumor | 3 / 76682 | 39 | |
pancreatic tumor | 0 / 104616 | 0 | |
primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
prostate cancer | 2 / 102680 | 19 | |
retinoblastoma | 0 / 46356 | 0 | |
skin tumor | 5 / 124949 | 40 | |
soft tissue/muscle tissue tumor | 4 / 125191 | 31 | |
uterine tumor | 6 / 90257 | 66 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
adipose tissue | 0 / 13106 | 0 | |
adrenal gland | 0 / 33197 | 0 | |
ascites | 16 / 40015 | 399 | |
bladder | 1 / 29757 | 33 | |
blood | 0 / 123478 | 0 | |
bone | 6 / 71655 | 83 | |
bone marrow | 3 / 48801 | 61 | |
brain | 16 / 1100989 | 14 | |
cervix | 2 / 48171 | 41 | |
connective tissue | 6 / 149255 | 40 | |
ear | 3 / 16212 | 185 | |
embryonic tissue | 1 / 215722 | 4 | |
esophagus | 5 / 20209 | 247 | |
eye | 9 / 211054 | 42 | |
heart | 1 / 89626 | 11 | |
intestine | 29 / 234472 | 123 | |
kidney | 23 / 211777 | 108 | |
larynx | 0 / 24145 | 0 | |
liver | 14 / 207743 | 67 | |
lung | 29 / 336974 | 86 | |
lymph | 0 / 44270 | 0 | |
lymph node | 5 / 91610 | 54 | |
mammary gland | 6 / 153271 | 39 | |
mouth | 6 / 67052 | 89 | |
muscle | 6 / 107715 | 55 | |
nerve | 0 / 15768 | 0 | |
ovary | 3 / 102051 | 29 | |
pancreas | 0 / 214812 | 0 | |
parathyroid | 0 / 20539 | 0 | |
pharynx | 0 / 41328 | 0 | |
pituitary gland | 0 / 16585 | 0 | |
placenta | 11 / 280825 | 39 | |
prostate | 3 / 189345 | 15 | |
salivary gland | 2 / 20155 | 99 | |
skin | 12 / 210574 | 56 | |
spleen | 1 / 53952 | 18 | |
stomach | 6 / 96619 | 62 | |
testis | 3 / 330442 | 9 | |
thymus | 3 / 81131 | 36 | |
thyroid | 6 / 47473 | 126 | |
tonsil | 0 / 16999 | 0 | |
trachea | 12 / 52413 | 228 | |
umbilical cord | 0 / 13680 | 0 | |
uterus | 14 / 232878 | 60 | |
vascular | 4 / 51780 | 77 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 211599_x_at
Cell line | Expression level | Expression bar |
---|---|---|
721_B_lymphoblasts | 4.7 | |
Adipocyte | 3.7 | |
AdrenalCortex | 3.75 | |
Adrenalgland | 3.1 | |
Amygdala | 3.95 | |
Appendix | 3.65 | |
AtrioventricularNode | 2.75 | |
BDCA4+_DentriticCells | 4.1 | |
Bonemarrow | 3.65 | |
BronchialEpithelialCells | 5.55 | |
CD105+_Endothelial | 3.7 | |
CD14+_Monocytes | 4.05 | |
CD19+_BCells(neg._sel.) | 4 | |
CD33+_Myeloid | 4.75 | |
CD34+ | 4.75 | |
CD4+_Tcells | 4.1 | |
CD56+_NKCells | 4.4 | |
CD71+_EarlyErythroid | 3.45 | |
CD8+_Tcells | 3.6 | |
CardiacMyocytes | 4.6 | |
Caudatenucleus | 3.3 | |
Cerebellum | 3 | |
CerebellumPeduncles | 4.15 | |
CiliaryGanglion | 2.55 | |
CingulateCortex | 3.75 | |
Colorectaladenocarcinoma | 3.8 | |
DorsalRootGanglion | 2.75 | |
FetalThyroid | 3.6 | |
Fetalbrain | 3.75 | |
Fetalliver | 3.15 | |
Fetallung | 3.15 | |
GlobusPallidus | 2.7 | |
Heart | 4.65 | |
Hypothalamus | 4 | |
Kidney | 3 | |
Leukemia_chronicMyelogenousK-562 | 3.35 | |
Leukemia_promyelocytic-HL-60 | 3.3 | |
Leukemialymphoblastic(MOLT-4) | 2.95 | |
Liver | 4.95 | |
Lung | 4.05 | |
Lymphnode | 3.25 | |
Lymphoma_burkitts(Daudi) | 4.7 | |
Lymphoma_burkitts(Raji) | 5.1 | |
MedullaOblongata | 3.4 | |
OccipitalLobe | 3.35 | |
OlfactoryBulb | 2.95 | |
Ovary | 2.45 | |
Pancreas | 2.95 | |
PancreaticIslet | 3.95 | |
ParietalLobe | 3.85 | |
Pituitary | 4.35 | |
Placenta | 3.9 | |
Pons | 3.5 | |
PrefrontalCortex | 4.65 | |
Prostate | 4.4 | |
Salivarygland | 2.9 | |
SkeletalMuscle | 4.3 | |
Skin | 2.8 | |
SmoothMuscle | 4.2 | |
Spinalcord | 3.95 | |
SubthalamicNucleus | 3.3 | |
SuperiorCervicalGanglion | 4.1 | |
TemporalLobe | 3.35 | |
Testis | 3.2 | |
TestisGermCell | 3.15 | |
TestisIntersitial | 3.1 | |
TestisLeydigCell | 3.65 | |
TestisSeminiferousTubule | 3.2 | |
Thalamus | 3.75 | |
Thymus | 2.95 | |
Thyroid | 4.8 | |
Tongue | 3.6 | |
Tonsil | 3.6 | |
Trachea | 3.5 | |
TrigeminalGanglion | 3.65 | |
Uterus | 3.05 | |
UterusCorpus | 4 | |
WholeBlood | 4.1 | |
Wholebrain | 3.2 | |
colon | 3.75 | |
pineal_day | 4.62 | |
pineal_night | 4.52 | |
retina | 4.55 | |
small_intestine | 3.6 |
Human Whole Brain Microarrayview in Allen Brain Atlas
- Probe name: A_23_P145846
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 5.29 ± 0.54 | |
Basal Forebrain | 6.87 ± 1.01 | |
Basal Part of Pons | 4.94 ± 0.91 | |
Cerebellar Cortex | 5.14 ± 0.93 | |
Cerebellar Nuclei | 6.21 ± 0.81 | |
Claustrum | 4.61 ± 0.95 | |
Epithalamus | 4.93 ± 0.57 | |
Frontal Lobe | 4.94 ± 0.92 | |
Globus Pallidus | 5.78 ± 0.75 | |
Hypothalamus | 5.2 ± 0.66 | |
Insula | 5.85 ± 0.82 | |
Limbic Lobe | 6.45 ± 1.45 | |
Mesencephalon | 5.65 ± 0.62 | |
Myelencephalon | 6.06 ± 1.25 | |
Occipital Lobe | 7.68 ± 0.51 | |
Parietal Lobe | 6.49 ± 0.81 | |
Pontine Tegmentum | 6.22 ± 1.15 | |
Striatum | 4.85 ± 1.39 | |
Subthalamus | 5.45 ± 1 | |
Temporal Lobe | 7.1 ± 0.6 | |
Thalamus | 5.5 ± 0.78 | |
White Matter | 6.29 ± 0.58 |
Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
---|---|---|---|---|
Met | CB | Cerebellum | 2.56 | |
3.08 | ||||
Met | CTX | Cerebral cortex | 5.6 | |
4.7 | ||||
Met | HIP | Hippocampal region | 1.09 | |
1.29 | ||||
Met | HPF | Hippocampal formation | 1.86 | |
1.99 | ||||
Met | HY | Hypothalamus | 0.43 | |
0.67 | ||||
Met | LSX | Lateral septal complex | 5.25 | |
4.73 | ||||
Met | MB | Midbrain | 0.57 | |
0.67 | ||||
Met | MY | Medulla | 2.74 | |
2.81 | ||||
Met | OLF | Olfactory bulb | 5.89 | |
6.88 | ||||
Met | P | Pons | 3.98 | |
5.57 | ||||
Met | PAL | Pallidum | 0.14 | |
0.15 | ||||
Met | RHP | Retrohippocampal region | 3.08 | |
2.68 | ||||
Met | sAMY | Striatum-like amygdalar nuclei | 2.39 | |
2.24 | ||||
Met | STR | Striatum | 1.03 | |
1.04 | ||||
Met | STRd | Striatum dorsal region | 0.78 | |
0.87 | ||||
Met | STRv | Striatum ventral region | 0.77 | |
0.7 | ||||
Met | TH | Thalamus | 0.72 | |
0.88 |
Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
---|---|---|---|---|---|
PAp00096835 | 22 | 899 | 920 | SCENIHLHSEAVLCTVPNDLLK | Peptide Atlas |