Annotation Detail for VCX3B
Basic Information Top
| Gene Symbol: | VCX3B ( MGC119815,VCX-C,VCXC ) |
|---|---|
| Gene Full Name: | variable charge, X-linked 3B |
| Band: | Xp22.31 |
| Quick Links | Entrez ID:425054; OMIM: NA; Uniprot ID:VCX3B_HUMAN; ENSEMBL ID: ENSG00000205642; HGNC ID: 31838 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.534814
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 0 / 564012 | 0 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 0 / 1939121 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 1 / 263845 | 3 |  |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 0 / 3360307 | 0 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 0 / 1100989 | 0 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 0 / 336974 | 0 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 207281_x_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 43.6 |  |
| Adipocyte | 49.8 | |
| AdrenalCortex | 59.55 |  |
| Adrenalgland | 47.8 | |
| Amygdala | 48.3 | |
| Appendix | 53.9 | |
| AtrioventricularNode | 49.9 | |
| BDCA4+_DentriticCells | 41.95 | |
| Bonemarrow | 57.35 | |
| BronchialEpithelialCells | 45.5 | |
| CD105+_Endothelial | 53.5 | |
| CD14+_Monocytes | 50.35 | |
| CD19+_BCells(neg._sel.) | 49.9 | |
| CD33+_Myeloid | 57.75 | |
| CD34+ | 57.15 | |
| CD4+_Tcells | 47.75 | |
| CD56+_NKCells | 50.5 | |
| CD71+_EarlyErythroid | 51 | |
| CD8+_Tcells | 37.85 | |
| CardiacMyocytes | 55.5 | |
| Caudatenucleus | 59.25 | |
| Cerebellum | 40.95 | |
| CerebellumPeduncles | 59.95 | |
| CiliaryGanglion | 39.25 | |
| CingulateCortex | 58 | |
| Colorectaladenocarcinoma | 34.75 | |
| DorsalRootGanglion | 47.2 | |
| FetalThyroid | 47.25 | |
| Fetalbrain | 46.35 | |
| Fetalliver | 44.25 | |
| Fetallung | 36.95 | |
| GlobusPallidus | 41.75 | |
| Heart | 65.05 | |
| Hypothalamus | 50.95 | |
| Kidney | 43.25 | |
| Leukemia_chronicMyelogenousK-562 | 46.8 | |
| Leukemia_promyelocytic-HL-60 | 42.75 | |
| Leukemialymphoblastic(MOLT-4) | 43.8 | |
| Liver | 67.75 | |
| Lung | 37.7 | |
| Lymphnode | 41 | |
| Lymphoma_burkitts(Daudi) | 62.95 | |
| Lymphoma_burkitts(Raji) | 64.8 | |
| MedullaOblongata | 44.3 | |
| OccipitalLobe | 55.15 | |
| OlfactoryBulb | 37.7 | |
| Ovary | 34.4 | |
| Pancreas | 46.35 | |
| PancreaticIslet | 52.05 | |
| ParietalLobe | 56.7 | |
| Pituitary | 61.6 | |
| Placenta | 47.1 | |
| Pons | 54.55 | |
| PrefrontalCortex | 56.7 | |
| Prostate | 54 | |
| Salivarygland | 55.75 | |
| SkeletalMuscle | 65.55 | |
| Skin | 42.5 | |
| SmoothMuscle | 53 | |
| Spinalcord | 52.05 | |
| SubthalamicNucleus | 62.9 | |
| SuperiorCervicalGanglion | 64.15 | |
| TemporalLobe | 45.2 | |
| Testis | 174 | |
| TestisGermCell | 88.2 | |
| TestisIntersitial | 106.4 | |
| TestisLeydigCell | 120.4 | |
| TestisSeminiferousTubule | 175.75 | |
| Thalamus | 55.85 | |
| Thymus | 36.2 | |
| Thyroid | 47.25 | |
| Tongue | 51.2 | |
| Tonsil | 47.4 | |
| Trachea | 54.65 | |
| TrigeminalGanglion | 54.85 | |
| Uterus | 30.85 | |
| UterusCorpus | 46.75 | |
| WholeBlood | 50.1 | |
| Wholebrain | 37.7 | |
| colon | 47.4 | |
| pineal_day | 46.48 | |
| pineal_night | 41.36 | |
| retina | 44.85 | |
| small_intestine | 45 | |
Mouse Brain ISH 