AutismKB 2.0

Annotation Detail for CTAGE5


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Basic Information Top
Gene Symbol:CTAGE5 ( MEA6,MGEA,MGEA11,MGEA6 )
Gene Full Name: CTAGE family, member 5
Band: 14q21.1
Quick LinksEntrez ID:4253; OMIM: 602132; Uniprot ID:CTGE5_HUMAN; ENSEMBL ID: ENSG00000150527; HGNC ID: 7057
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst1 / 6231916
fetus13 / 56401223
neonate0 / 310970 
infant0 / 236200 
juvenile14 / 55556251
adult73 / 193912137
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor3 / 12794234
bladder carcinoma0 / 174750 
breast (mammary gland) tumor2 / 9417821
cervical tumor2 / 3436658
chondrosarcoma4 / 8282348
colorectal tumor6 / 11424652
esophageal tumor1 / 1729057
gastrointestinal tumor10 / 11936983
germ cell tumor2 / 2638457
glioma0 / 1068830 
head and neck tumor10 / 13630273
kidney tumor1 / 6895914
leukemia18 / 95842187
liver tumor20 / 96359207
lung tumor2 / 10312719
lymphoma1 / 7175513
non-neoplasia4 / 9725041
normal115 / 336030734
ovarian tumor2 / 7668226
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS4 / 12568031
prostate cancer2 / 10268019
retinoblastoma1 / 4635621
skin tumor2 / 12494916
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor10 / 90257110
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland4 / 33197120
ascites1 / 4001524
bladder1 / 2975733
blood13 / 123478105
bone3 / 7165541
bone marrow1 / 4880120
brain12 / 110098910
cervix2 / 4817141
connective tissue4 / 14925526
ear0 / 162120 
embryonic tissue3 / 21572213
esophagus1 / 2020949
eye5 / 21105423
heart3 / 8962633
intestine13 / 23447255
kidney23 / 211777108
larynx0 / 241450 
liver29 / 207743139
lung10 / 33697429
lymph1 / 4427022
lymph node5 / 9161054
mammary gland4 / 15327126
mouth9 / 67052134
muscle5 / 10771546
nerve0 / 157680 
ovary3 / 10205129
pancreas8 / 21481237
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland1 / 1658560
placenta10 / 28082535
prostate4 / 18934521
salivary gland0 / 201550 
skin5 / 21057423
spleen0 / 539520 
stomach8 / 9661982
testis11 / 33044233
thymus2 / 8113124
thyroid2 / 4747342
tonsil1 / 1699958
trachea4 / 5241376
umbilical cord0 / 136800 
uterus16 / 23287868
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 215930_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts18.1
Adipocyte15.45
AdrenalCortex31.3
Adrenalgland20.2
Amygdala16.2
Appendix24.5
AtrioventricularNode31.45
BDCA4+_DentriticCells16.85
Bonemarrow22.75
BronchialEpithelialCells15
CD105+_Endothelial18.45
CD14+_Monocytes29.75
CD19+_BCells(neg._sel.)21.7
CD33+_Myeloid34.9
CD34+44.7
CD4+_Tcells17.35
CD56+_NKCells20.05
CD71+_EarlyErythroid17.55
CD8+_Tcells17.45
CardiacMyocytes21.85
Caudatenucleus15.5
Cerebellum14.05
CerebellumPeduncles26.6
CiliaryGanglion22.45
CingulateCortex20.35
Colorectaladenocarcinoma15.35
DorsalRootGanglion23.9
FetalThyroid23.85
Fetalbrain13.7
Fetalliver22.3
Fetallung10.85
GlobusPallidus17.9
Heart36.7
Hypothalamus15.75
Kidney26.2
Leukemia_chronicMyelogenousK-56214.9
Leukemia_promyelocytic-HL-6021.5
Leukemialymphoblastic(MOLT-4)10.45
Liver37.85
Lung16.8
Lymphnode14.1
Lymphoma_burkitts(Daudi)29.75
Lymphoma_burkitts(Raji)31.5
MedullaOblongata14.65
OccipitalLobe15.95
OlfactoryBulb12.45
Ovary19.05
Pancreas17
PancreaticIslet38.9
ParietalLobe21.9
Pituitary26.75
Placenta11.95
Pons20.3
PrefrontalCortex18.6
Prostate19.8
Salivarygland27.8
SkeletalMuscle41.1
Skin27.15
SmoothMuscle19.1
Spinalcord16.3
SubthalamicNucleus20.55
SuperiorCervicalGanglion37.1
TemporalLobe17.45
Testis14.1
TestisGermCell23.75
TestisIntersitial17.8
TestisLeydigCell25.85
TestisSeminiferousTubule16.4
Thalamus19
Thymus11.2
Thyroid18.9
Tongue23.9
Tonsil17.55
Trachea23.2
TrigeminalGanglion34.2
Uterus12.95
UterusCorpus16.8
WholeBlood21.45
Wholebrain10.1
colon21.75
pineal_day22.28
pineal_night24.88
retina19.8
small_intestine29.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P333326
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.28 ± 0.22
Basal Forebrain6.96 ± 0.25
Basal Part of Pons6.78 ± 0.17
Cerebellar Cortex6.91 ± 0.26
Cerebellar Nuclei6.54 ± 0.19
Claustrum7.1 ± 0.49
Epithalamus7.27 ± 0.26
Frontal Lobe6.84 ± 0.36
Globus Pallidus7.29 ± 0.2
Hypothalamus7.19 ± 0.43
Insula6.96 ± 0.22
Limbic Lobe7.1 ± 0.3
Mesencephalon6.93 ± 0.31
Myelencephalon6.92 ± 0.36
Occipital Lobe7.2 ± 0.27
Parietal Lobe7.01 ± 0.31
Pontine Tegmentum6.98 ± 0.35
Striatum7.18 ± 0.25
Subthalamus6.85 ± 0.14
Temporal Lobe6.91 ± 0.29
Thalamus6.83 ± 0.27
White Matter7.59 ± 0.13
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Mgea6CBCerebellum0
0
Mgea6CTXCerebral cortex0
0
Mgea6HIPHippocampal region0
0
Mgea6HPFHippocampal formation0
0
Mgea6HYHypothalamus0
0
Mgea6LSXLateral septal complex0
0
Mgea6MBMidbrain0
0
Mgea6MYMedulla0
0
Mgea6OLFOlfactory bulb0
0
Mgea6PPons0
0
Mgea6PALPallidum0
0
Mgea6RHPRetrohippocampal region0
0
Mgea6sAMYStriatum-like amygdalar nuclei0
0
Mgea6STRStriatum0
0
Mgea6STRdStriatum dorsal region0
0
Mgea6STRvStriatum ventral region0
0
Mgea6THThalamus0
0
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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