AutismKB 2.0

Annotation Detail for MIPEP


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Basic Information Top
Gene Symbol:MIPEP ( HMIP,MIP )
Gene Full Name: mitochondrial intermediate peptidase
Band: 13q12.12
Quick LinksEntrez ID:4285; OMIM: 602241; Uniprot ID:MIPEP_HUMAN; ENSEMBL ID: ENSG00000027001; HGNC ID: 7104
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body4 / 7076156
blastocyst3 / 6231948
fetus16 / 56401228
neonate2 / 3109764
infant1 / 2362042
juvenile2 / 5555635
adult83 / 193912142
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor26 / 94178276
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor3 / 11424626
esophageal tumor0 / 172900 
gastrointestinal tumor5 / 11936941
germ cell tumor6 / 26384522
glioma2 / 10688318
head and neck tumor14 / 136302102
kidney tumor2 / 6895929
leukemia1 / 9584210
liver tumor2 / 9635920
lung tumor0 / 1031270 
lymphoma5 / 7175569
non-neoplasia0 / 972500 
normal96 / 336030728
ovarian tumor1 / 7668213
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS5 / 12568039
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor8 / 12494964
soft tissue/muscle tissue tumor12 / 12519195
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites4 / 4001599
bladder0 / 297570 
blood6 / 12347848
bone1 / 7165513
bone marrow2 / 4880140
brain24 / 110098921
cervix0 / 481710 
connective tissue11 / 14925573
ear0 / 162120 
embryonic tissue7 / 21572232
esophagus0 / 202090 
eye2 / 2110549
heart5 / 8962655
intestine12 / 23447251
kidney14 / 21177766
larynx0 / 241450 
liver2 / 2077439
lung9 / 33697426
lymph0 / 442700 
lymph node1 / 9161010
mammary gland30 / 153271195
mouth1 / 6705214
muscle1 / 1077159
nerve0 / 157680 
ovary1 / 1020519
pancreas4 / 21481218
parathyroid4 / 20539194
pharynx10 / 41328241
pituitary gland0 / 165850 
placenta1 / 2808253
prostate3 / 18934515
salivary gland0 / 201550 
skin13 / 21057461
spleen3 / 5395255
stomach1 / 9661910
testis5 / 33044215
thymus1 / 8113112
thyroid4 / 4747384
tonsil0 / 169990 
trachea5 / 5241395
umbilical cord0 / 136800 
uterus6 / 23287825
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204305_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.3
Adipocyte4.25
AdrenalCortex4.6
Adrenalgland3.65
Amygdala4.55
Appendix4.25
AtrioventricularNode3.2
BDCA4+_DentriticCells4.55
Bonemarrow4.15
BronchialEpithelialCells6.15
CD105+_Endothelial4.35
CD14+_Monocytes4.45
CD19+_BCells(neg._sel.)5.1
CD33+_Myeloid5.2
CD34+5.35
CD4+_Tcells4.55
CD56+_NKCells5.05
CD71+_EarlyErythroid3.9
CD8+_Tcells4.05
CardiacMyocytes5.35
Caudatenucleus4.15
Cerebellum3.4
CerebellumPeduncles4.8
CiliaryGanglion2.9
CingulateCortex4.4
Colorectaladenocarcinoma4.3
DorsalRootGanglion3.15
FetalThyroid4.1
Fetalbrain4.25
Fetalliver4.75
Fetallung3.4
GlobusPallidus3.1
Heart7.35
Hypothalamus4.85
Kidney9
Leukemia_chronicMyelogenousK-5623.8
Leukemia_promyelocytic-HL-603.8
Leukemialymphoblastic(MOLT-4)3.35
Liver5.7
Lung6.75
Lymphnode3.6
Lymphoma_burkitts(Daudi)5.45
Lymphoma_burkitts(Raji)6
MedullaOblongata3.95
OccipitalLobe3.8
OlfactoryBulb3.35
Ovary2.8
Pancreas3.4
PancreaticIslet4.55
ParietalLobe4.6
Pituitary5.1
Placenta4.25
Pons4
PrefrontalCortex5.4
Prostate5.45
Salivarygland3.4
SkeletalMuscle5.05
Skin3.3
SmoothMuscle4.85
Spinalcord4.65
SubthalamicNucleus3.9
SuperiorCervicalGanglion4.9
TemporalLobe3.85
Testis3.75
TestisGermCell3.6
TestisIntersitial3.55
TestisLeydigCell4.2
TestisSeminiferousTubule3.8
Thalamus4.35
Thymus3.3
Thyroid5.45
Tongue4.25
Tonsil4.1
Trachea3.95
TrigeminalGanglion4.2
Uterus3.55
UterusCorpus3.8
WholeBlood4.65
Wholebrain3.7
colon5.7
pineal_day5.26
pineal_night5.16
retina5.15
small_intestine4.75
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_7855_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.7 ± 0.33
Basal Forebrain4.36 ± 0.2
Basal Part of Pons4.58 ± 0.56
Cerebellar Cortex4.37 ± 0.71
Cerebellar Nuclei4.34 ± 0.45
Claustrum5 ± 1.12
Epithalamus4.98 ± 0.65
Frontal Lobe4.55 ± 0.67
Globus Pallidus4.99 ± 0.43
Hypothalamus4.31 ± 0.49
Insula4.37 ± 0.84
Limbic Lobe5.12 ± 0.81
Mesencephalon4.66 ± 0.63
Myelencephalon4.54 ± 0.65
Occipital Lobe4.51 ± 0.91
Parietal Lobe4.47 ± 0.65
Pontine Tegmentum4.56 ± 0.75
Striatum4.75 ± 0.58
Subthalamus4.57 ± 0.42
Temporal Lobe4.64 ± 0.7
Thalamus4.36 ± 0.49
White Matter6.1 ± 1.75
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
MipepCBCerebellum5.4
7.89
MipepCTXCerebral cortex2.12
3.32
MipepHIPHippocampal region1.03
1.34
MipepHPFHippocampal formation0.73
0.93
MipepHYHypothalamus0.34
0.25
MipepLSXLateral septal complex2.96
6.35
MipepMBMidbrain2.98
3.13
MipepMYMedulla11.3
13.03
MipepOLFOlfactory bulb2.61
3.53
MipepPPons6.21
6.11
MipepPALPallidum1.25
1.06
MipepRHPRetrohippocampal region0.19
0.31
MipepsAMYStriatum-like amygdalar nuclei0.12
0.13
MipepSTRStriatum0.52
0.81
MipepSTRdStriatum dorsal region0.31
0.38
MipepSTRvStriatum ventral region0.22
0.13
MipepTHThalamus3.12
2.98
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00082057 13 441 453 ADKPHQDCHFTIR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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