AutismKB 2.0

Annotation Detail for MIAT


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Basic Information Top
Gene Symbol:MIAT ( C22orf35,FLJ25887,FLJ25967,FLJ38367,FLJ45323,GOMAFU,NCRNA00066,RNCR2 )
Gene Full Name: myocardial infarction associated transcript (non-protein coding)
Band: 22q12.1
Quick LinksEntrez ID:440823; OMIM: 611082; Uniprot ID:; ENSEMBL ID: ; HGNC ID: 33425
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body5 / 7076170
blastocyst23 / 62319369
fetus134 / 564012237
neonate0 / 310970 
infant2 / 2362084
juvenile5 / 5555689
adult81 / 193912141
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor7 / 26384526
glioma1 / 1068839
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor2 / 9635920
lung tumor4 / 10312738
lymphoma2 / 7175527
non-neoplasia15 / 97250154
normal369 / 3360307109
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS11 / 12568087
prostate cancer0 / 1026800 
retinoblastoma1 / 4635621
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor4 / 9025744
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder0 / 297570 
blood2 / 12347816
bone0 / 716550 
bone marrow1 / 4880120
brain297 / 1100989269
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue34 / 215722157
esophagus0 / 202090 
eye22 / 211054104
heart0 / 896260 
intestine5 / 23447221
kidney1 / 2117774
larynx0 / 241450 
liver1 / 2077434
lung30 / 33697489
lymph0 / 442700 
lymph node1 / 9161010
mammary gland1 / 1532716
mouth1 / 6705214
muscle1 / 1077159
nerve5 / 15768317
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland7 / 16585422
placenta6 / 28082521
prostate1 / 1893455
salivary gland0 / 201550 
skin2 / 2105749
spleen2 / 5395237
stomach0 / 966190 
testis5 / 33044215
thymus1 / 8113112
thyroid0 / 474730 
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus4 / 23287817
vascular0 / 517800 
Microarray in BioGPS Top
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_4361_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.53 ± 0.94
Basal Forebrain2.91 ± 0.5
Basal Part of Pons3.44 ± 0.77
Cerebellar Cortex2.89 ± 0.89
Cerebellar Nuclei3.14 ± 0.53
Claustrum3.66 ± 1.03
Epithalamus3 ± 0.92
Frontal Lobe3.23 ± 0.71
Globus Pallidus2.61 ± 0.83
Hypothalamus2.99 ± 0.78
Insula3.26 ± 0.76
Limbic Lobe3.45 ± 0.82
Mesencephalon3.41 ± 0.83
Myelencephalon3.35 ± 0.75
Occipital Lobe4.57 ± 0.69
Parietal Lobe3.56 ± 0.76
Pontine Tegmentum3.36 ± 0.83
Striatum2.94 ± 0.92
Subthalamus3.6 ± 0.41
Temporal Lobe3.43 ± 0.73
Thalamus3.26 ± 0.78
White Matter1.93 ± 0.54
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
A230057G18RikCBCerebellum15.18
21.77
A230057G18RikCTXCerebral cortex100
100
A230057G18RikHIPHippocampal region100
100
A230057G18RikHPFHippocampal formation100
100
A230057G18RikHYHypothalamus100
100
A230057G18RikLSXLateral septal complex100
100
A230057G18RikMBMidbrain100
100
A230057G18RikMYMedulla96.51
100
A230057G18RikOLFOlfactory bulb100
100
A230057G18RikPPons100
100
A230057G18RikPALPallidum100
100
A230057G18RikRHPRetrohippocampal region100
100
A230057G18RiksAMYStriatum-like amygdalar nuclei100
100
A230057G18RikSTRStriatum60.03
60.82
A230057G18RikSTRdStriatum dorsal region33.52
34.23
A230057G18RikSTRvStriatum ventral region46
38.96
A230057G18RikTHThalamus100
100
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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