Annotation Detail for RNF216L
Basic Information Top
| Gene Symbol: | RNF216L ( FLJ18559,FLJ98567,FLJ99839,hCG2040556 ) |
|---|---|
| Gene Full Name: | ring finger protein 216-like |
| Band: | 7p22.1 |
| Quick Links | Entrez ID:441191; OMIM: NA; Uniprot ID:; ENSEMBL ID: ; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.520636
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 24 / 564012 | 42 | |
| neonate | 3 / 31097 | 96 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 3 / 55556 | 53 | |
| adult | 89 / 1939121 | 45 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 36 / 263845 | 136 | |
| glioma | 13 / 106883 | 121 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 1 / 95842 | 10 |  |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 134 / 3360307 | 39 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 14 / 125680 | 111 | |
| prostate cancer | 6 / 102680 | 58 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 1 / 29757 | 33 | |
| blood | 3 / 123478 | 24 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 51 / 1100989 | 46 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 8 / 149255 | 53 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 10 / 215722 | 46 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 5 / 211054 | 23 | |
| heart | 2 / 89626 | 22 | |
| intestine | 8 / 234472 | 34 | |
| kidney | 7 / 211777 | 33 | |
| larynx | 0 / 24145 | 0 | |
| liver | 8 / 207743 | 38 | |
| lung | 7 / 336974 | 20 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 6 / 91610 | 65 | |
| mammary gland | 9 / 153271 | 58 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 10 / 214812 | 46 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 13 / 189345 | 68 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 8 / 210574 | 37 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 0 / 96619 | 0 | |
| testis | 33 / 330442 | 99 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 10 / 232878 | 42 | |
| vascular | 1 / 51780 | 19 | |
- Probe name: A_24_P469641
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.07 ± 0.21 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.25 ± 0.1 | |
| Basal Part of Pons | 6.98 ± 0.14 | |
| Cerebellar Cortex | 7.2 ± 0.2 | |
| Cerebellar Nuclei | 6.94 ± 0.18 | |
| Claustrum | 6.84 ± 0.31 | |
| Epithalamus | 7.39 ± 0.17 | |
| Frontal Lobe | 7.07 ± 0.23 | |
| Globus Pallidus | 7.51 ± 0.18 | |
| Hypothalamus | 7.39 ± 0.19 | |
| Insula | 7.11 ± 0.22 | |
| Limbic Lobe | 7.04 ± 0.25 | |
| Mesencephalon | 7.16 ± 0.27 | |
| Myelencephalon | 7.12 ± 0.25 | |
| Occipital Lobe | 7.21 ± 0.23 | |
| Parietal Lobe | 7.1 ± 0.25 | |
| Pontine Tegmentum | 7.09 ± 0.29 | |
| Striatum | 7.2 ± 0.22 | |
| Subthalamus | 7.14 ± 0.23 | |
| Temporal Lobe | 7.08 ± 0.22 | |
| Thalamus | 7.07 ± 0.24 | |
| White Matter | 7.79 ± 0.13 | |
Mouse Brain ISH 