Annotation Detail for NRARP
Basic Information Top
| Gene Symbol: | NRARP ( MGC61598 ) |
|---|---|
| Gene Full Name: | NOTCH-regulated ankyrin repeat protein |
| Band: | 9q34.3 |
| Quick Links | Entrez ID:441478; OMIM: NA; Uniprot ID:NRARP_HUMAN; ENSEMBL ID: ENSG00000198435; HGNC ID: 33843 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.535075
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 8 / 564012 | 14 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 39 / 1939121 | 20 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 2 / 34366 | 58 |  |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 6 / 119369 | 50 | |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 1 / 96359 | 10 |  |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 55 / 3360307 | 16 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 9 / 1100989 | 8 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 9 / 211054 | 42 | |
| heart | 3 / 89626 | 33 | |
| intestine | 9 / 234472 | 38 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 3 / 207743 | 14 | |
| lung | 9 / 336974 | 26 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 9 / 214812 | 41 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 8 / 280825 | 28 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 4 / 96619 | 41 | |
| testis | 4 / 330442 | 12 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 2 / 232878 | 8 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_939_PI416379584
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.37 ± 0.19 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.19 ± 0.25 | |
| Basal Part of Pons | 7.48 ± 0.35 | |
| Cerebellar Cortex | 7.93 ± 0.16 | |
| Cerebellar Nuclei | 8.65 ± 0.19 | |
| Claustrum | 7.7 ± 0.49 | |
| Epithalamus | 8.62 ± 0.46 | |
| Frontal Lobe | 8.29 ± 0.43 | |
| Globus Pallidus | 9.23 ± 0.34 | |
| Hypothalamus | 8.5 ± 0.48 | |
| Insula | 8.43 ± 0.23 | |
| Limbic Lobe | 8.09 ± 0.47 | |
| Mesencephalon | 8.57 ± 0.48 | |
| Myelencephalon | 8.46 ± 0.52 | |
| Occipital Lobe | 8.58 ± 0.38 | |
| Parietal Lobe | 8.44 ± 0.41 | |
| Pontine Tegmentum | 8.63 ± 0.28 | |
| Striatum | 9.29 ± 0.33 | |
| Subthalamus | 8.33 ± 0.32 | |
| Temporal Lobe | 8.34 ± 0.3 | |
| Thalamus | 8.6 ± 0.49 | |
| White Matter | 6.93 ± 0.53 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Nrarp | CB | Cerebellum | 12.73 | |
| 16.45 | | |||
| Nrarp | CTX | Cerebral cortex | 25.92 | |
| 20.09 | | |||
| Nrarp | HIP | Hippocampal region | 8.41 | |
| 8.28 | | |||
| Nrarp | HPF | Hippocampal formation | 9.87 | |
| 8.73 | | |||
| Nrarp | HY | Hypothalamus | 7.66 | |
| 6.11 | | |||
| Nrarp | LSX | Lateral septal complex | 11.14 | |
| 12.65 | | |||
| Nrarp | MB | Midbrain | 5.94 | |
| 6.49 | | |||
| Nrarp | MY | Medulla | 6.05 | |
| 7.36 | | |||
| Nrarp | OLF | Olfactory bulb | 30.5 | |
| 24.85 | | |||
| Nrarp | P | Pons | 5.84 | |
| 6.88 | | |||
| Nrarp | PAL | Pallidum | 8.25 | |
| 7.39 | | |||
| Nrarp | RHP | Retrohippocampal region | 13.3 | |
| 10 | | |||
| Nrarp | sAMY | Striatum-like amygdalar nuclei | 9.87 | |
| 7.24 | | |||
| Nrarp | STR | Striatum | 11.66 | |
| 8.83 | | |||
| Nrarp | STRd | Striatum dorsal region | 9.27 | |
| 7 | | |||
| Nrarp | STRv | Striatum ventral region | 22.27 | |
| 15.15 | | |||
| Nrarp | TH | Thalamus | 5.94 | |
| 5.28 | |