AutismKB 2.0

Annotation Detail for MT1X


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Basic Information Top
Gene Symbol:MT1X ( MT-1l,MT1 )
Gene Full Name: metallothionein 1X
Band: 16q13
Quick LinksEntrez ID:4501; OMIM: 156359; Uniprot ID:MT1X_HUMAN; ENSEMBL ID: ENSG00000187193; HGNC ID: 7405
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst1 / 6231916
fetus17 / 56401230
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult125 / 193912164
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor7 / 26384526
glioma19 / 106883177
head and neck tumor1 / 1363027
kidney tumor4 / 6895958
leukemia2 / 9584220
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia6 / 9725061
normal209 / 336030762
ovarian tumor5 / 7668265
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor8 / 12519163
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder0 / 297570 
blood2 / 12347816
bone1 / 7165513
bone marrow3 / 4880161
brain30 / 110098927
cervix0 / 481710 
connective tissue19 / 149255127
ear0 / 162120 
embryonic tissue22 / 215722101
esophagus0 / 202090 
eye5 / 21105423
heart6 / 8962666
intestine12 / 23447251
kidney9 / 21177742
larynx1 / 2414541
liver26 / 207743125
lung7 / 33697420
lymph0 / 442700 
lymph node1 / 9161010
mammary gland5 / 15327132
mouth0 / 670520 
muscle60 / 107715557
nerve0 / 157680 
ovary5 / 10205148
pancreas2 / 2148129
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta0 / 2808250 
prostate11 / 18934558
salivary gland1 / 2015549
skin1 / 2105744
spleen2 / 5395237
stomach2 / 9661920
testis8 / 33044224
thymus0 / 811310 
thyroid1 / 4747321
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus11 / 23287847
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 208581_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts94
Adipocyte4806.2
AdrenalCortex4912.85
Adrenalgland3294.35
Amygdala811.15
Appendix503.3
AtrioventricularNode1734.2
BDCA4+_DentriticCells163.65
Bonemarrow133.25
BronchialEpithelialCells14846.9
CD105+_Endothelial172.4
CD14+_Monocytes413.85
CD19+_BCells(neg._sel.)46.1
CD33+_Myeloid142.15
CD34+344.85
CD4+_Tcells421.55
CD56+_NKCells390.5
CD71+_EarlyErythroid24.75
CD8+_Tcells494
CardiacMyocytes680.85
Caudatenucleus863.8
Cerebellum452
CerebellumPeduncles647.2
CiliaryGanglion960.75
CingulateCortex928.4
Colorectaladenocarcinoma1369.9
DorsalRootGanglion838.55
FetalThyroid5329.95
Fetalbrain384.15
Fetalliver8658.3
Fetallung5905.75
GlobusPallidus608.25
Heart2246.05
Hypothalamus1751.75
Kidney6617.3
Leukemia_chronicMyelogenousK-56285.85
Leukemia_promyelocytic-HL-60191.45
Leukemialymphoblastic(MOLT-4)241.4
Liver22332.65
Lung3217.7
Lymphnode328.55
Lymphoma_burkitts(Daudi)337.15
Lymphoma_burkitts(Raji)572.9
MedullaOblongata540
OccipitalLobe668.85
OlfactoryBulb2178.15
Ovary1852.3
Pancreas3384.1
PancreaticIslet6403.6
ParietalLobe523.6
Pituitary511.15
Placenta399
Pons1032
PrefrontalCortex1652.1
Prostate2983.05
Salivarygland748.35
SkeletalMuscle9674.05
Skin1781.55
SmoothMuscle2171.65
Spinalcord1629.45
SubthalamicNucleus1545.1
SuperiorCervicalGanglion233.25
TemporalLobe2574.25
Testis278.2
TestisGermCell224.35
TestisIntersitial77.95
TestisLeydigCell155.6
TestisSeminiferousTubule208.3
Thalamus1338.15
Thymus526.15
Thyroid8007.3
Tongue1814.8
Tonsil274.1
Trachea617.45
TrigeminalGanglion893.3
Uterus382.95
UterusCorpus1522.2
WholeBlood339.4
Wholebrain1692.1
colon228.05
pineal_day678.12
pineal_night468.9
retina2692.1
small_intestine402.45
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P414343
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala12.12 ± 0.35
Basal Forebrain12.15 ± 0.23
Basal Part of Pons11 ± 0.29
Cerebellar Cortex11.31 ± 0.23
Cerebellar Nuclei12.01 ± 0.63
Claustrum11.41 ± 0.49
Epithalamus12.43 ± 0.2
Frontal Lobe11.83 ± 0.46
Globus Pallidus13.38 ± 0.45
Hypothalamus11.89 ± 0.5
Insula11.97 ± 0.46
Limbic Lobe11.7 ± 0.66
Mesencephalon12.19 ± 0.56
Myelencephalon11.95 ± 0.64
Occipital Lobe11.87 ± 0.45
Parietal Lobe11.96 ± 0.55
Pontine Tegmentum12.27 ± 0.41
Striatum12.72 ± 0.41
Subthalamus11.85 ± 0.35
Temporal Lobe11.76 ± 0.42
Thalamus12.23 ± 0.43
White Matter11.34 ± 0.56
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00009409 8 44 51 CAQGCICK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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