AutismKB 2.0

Annotation Detail for MUC4


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Basic Information Top
Gene Symbol:MUC4 ( HSA276359 )
Gene Full Name: mucin 4, cell surface associated
Band: 3q29
Quick LinksEntrez ID:4585; OMIM: 158372; Uniprot ID:MUC4_HUMAN; ENSEMBL ID: ENSG00000145113; HGNC ID: 7514
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus2 / 5640123
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult242 / 1939121124
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor10 / 94178106
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor24 / 114246210
esophageal tumor0 / 172900 
gastrointestinal tumor17 / 119369142
germ cell tumor5 / 26384518
glioma0 / 1068830 
head and neck tumor101 / 136302741
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor20 / 103127193
lymphoma0 / 717550 
non-neoplasia4 / 9725041
normal52 / 336030715
ovarian tumor0 / 766820 
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor11 / 90257121
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites1 / 4001524
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain8 / 11009897
cervix1 / 4817120
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye3 / 21105414
heart0 / 896260 
intestine49 / 234472208
kidney23 / 211777108
larynx4 / 24145165
liver0 / 2077430 
lung27 / 33697480
lymph0 / 442700 
lymph node0 / 916100 
mammary gland11 / 15327171
mouth27 / 67052402
muscle3 / 10771527
nerve0 / 157680 
ovary0 / 1020510 
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx72 / 413281742
pituitary gland0 / 165850 
placenta4 / 28082514
prostate9 / 18934547
salivary gland0 / 201550 
skin1 / 2105744
spleen0 / 539520 
stomach18 / 96619186
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil1 / 1699958
trachea6 / 52413114
umbilical cord0 / 136800 
uterus13 / 23287855
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 217109_at
Cell line Expression level Expression bar
721_B_lymphoblasts8.55
Adipocyte8.35
AdrenalCortex11.2
Adrenalgland8.05
Amygdala9.05
Appendix9.55
AtrioventricularNode12.2
BDCA4+_DentriticCells8.5
Bonemarrow9.4
BronchialEpithelialCells8.2
CD105+_Endothelial8.9
CD14+_Monocytes9.4
CD19+_BCells(neg._sel.)9.05
CD33+_Myeloid10.75
CD34+9.8
CD4+_Tcells9.55
CD56+_NKCells9.15
CD71+_EarlyErythroid8.7
CD8+_Tcells8.25
CardiacMyocytes13.45
Caudatenucleus8.1
Cerebellum6.85
CerebellumPeduncles11.55
CiliaryGanglion16.35
CingulateCortex9.55
Colorectaladenocarcinoma9.05
DorsalRootGanglion10.7
FetalThyroid8.75
Fetalbrain8.65
Fetalliver7.5
Fetallung13.65
GlobusPallidus8.45
Heart13.7
Hypothalamus9.3
Kidney7.6
Leukemia_chronicMyelogenousK-56216.8
Leukemia_promyelocytic-HL-607.85
Leukemialymphoblastic(MOLT-4)6.7
Liver13.45
Lung9.8
Lymphnode7.45
Lymphoma_burkitts(Daudi)11.9
Lymphoma_burkitts(Raji)13.65
MedullaOblongata7.3
OccipitalLobe8.05
OlfactoryBulb7.1
Ovary7.4
Pancreas7.05
PancreaticIslet9.95
ParietalLobe10.05
Pituitary10.5
Placenta8.95
Pons9
PrefrontalCortex10.3
Prostate43.8
Salivarygland7.65
SkeletalMuscle13.6
Skin12.15
SmoothMuscle9.35
Spinalcord9.5
SubthalamicNucleus8.9
SuperiorCervicalGanglion16.75
TemporalLobe8.45
Testis7.65
TestisGermCell7.4
TestisIntersitial7.65
TestisLeydigCell10.7
TestisSeminiferousTubule10.4
Thalamus9.35
Thymus6.65
Thyroid10.5
Tongue9.9
Tonsil19.25
Trachea51.1
TrigeminalGanglion11.05
Uterus7.2
UterusCorpus13.45
WholeBlood8.7
Wholebrain7.2
colon161
pineal_day10.82
pineal_night11.7
retina10.975
small_intestine7.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P239176
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.14 ± 0.37
Basal Forebrain8.04 ± 0.2
Basal Part of Pons8.01 ± 0.24
Cerebellar Cortex7.8 ± 0.16
Cerebellar Nuclei8.46 ± 0.3
Claustrum8.04 ± 0.33
Epithalamus7.69 ± 0.25
Frontal Lobe8.07 ± 0.3
Globus Pallidus8.63 ± 0.25
Hypothalamus8.02 ± 0.37
Insula7.97 ± 0.33
Limbic Lobe7.98 ± 0.3
Mesencephalon8.12 ± 0.26
Myelencephalon8.04 ± 0.35
Occipital Lobe7.86 ± 0.3
Parietal Lobe7.98 ± 0.28
Pontine Tegmentum8.03 ± 0.29
Striatum8.32 ± 0.26
Subthalamus8.15 ± 0.04
Temporal Lobe7.95 ± 0.3
Thalamus8.14 ± 0.19
White Matter8.18 ± 0.23
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Muc4CBCerebellum5.85
8.25
Muc4CTXCerebral cortex0.58
0.97
Muc4HIPHippocampal region0.55
1.16
Muc4HPFHippocampal formation0.57
1.15
Muc4HYHypothalamus0.18
0.21
Muc4LSXLateral septal complex0.05
0
Muc4MBMidbrain0.16
0.15
Muc4MYMedulla3.84
4.1
Muc4OLFOlfactory bulb1.14
1.36
Muc4PPons0.88
1.02
Muc4PALPallidum0.34
0.38
Muc4RHPRetrohippocampal region0.64
1.21
Muc4sAMYStriatum-like amygdalar nuclei0.34
0.29
Muc4STRStriatum0.6
0.67
Muc4STRdStriatum dorsal region0.42
0.61
Muc4STRvStriatum ventral region1.57
1.18
Muc4THThalamus1.18
1.6
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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