AutismKB 2.0

Annotation Detail for MUC6


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:MUC6 ( MUC-6 )
Gene Full Name: mucin 6, oligomeric mucus/gel-forming
Band: 11p15.5
Quick LinksEntrez ID:4588; OMIM: 158374; Uniprot ID:MUC6_HUMAN; ENSEMBL ID: ENSG00000184956; HGNC ID: 7517
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus1 / 5640121
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult41 / 193912121
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor7 / 9417874
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor13 / 119369108
germ cell tumor0 / 2638450 
glioma1 / 1068839
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal77 / 336030722
ovarian tumor0 / 766820 
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites2 / 4001549
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain4 / 11009893
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine3 / 23447212
kidney1 / 2117774
larynx1 / 2414541
liver0 / 2077430 
lung1 / 3369742
lymph0 / 442700 
lymph node0 / 916100 
mammary gland7 / 15327145
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate21 / 189345110
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach57 / 96619589
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 214133_at
Cell line Expression level Expression bar
721_B_lymphoblasts14.1
Adipocyte13.1
AdrenalCortex17.6
Adrenalgland12.2
Amygdala12.45
Appendix16.05
AtrioventricularNode9.9
BDCA4+_DentriticCells10.65
Bonemarrow13.55
BronchialEpithelialCells10.9
CD105+_Endothelial11.8
CD14+_Monocytes13.6
CD19+_BCells(neg._sel.)12.3
CD33+_Myeloid13.35
CD34+13.9
CD4+_Tcells13.3
CD56+_NKCells11
CD71+_EarlyErythroid12.25
CD8+_Tcells11.35
CardiacMyocytes18.35
Caudatenucleus16.15
Cerebellum10.4
CerebellumPeduncles17.3
CiliaryGanglion9.25
CingulateCortex14.35
Colorectaladenocarcinoma12.5
DorsalRootGanglion12.25
FetalThyroid13.55
Fetalbrain14.6
Fetalliver12.35
Fetallung8.25
GlobusPallidus10.1
Heart16.2
Hypothalamus13.7
Kidney16.5
Leukemia_chronicMyelogenousK-56211.5
Leukemia_promyelocytic-HL-6011.5
Leukemialymphoblastic(MOLT-4)10.85
Liver17.95
Lung14.6
Lymphnode11.5
Lymphoma_burkitts(Daudi)19.15
Lymphoma_burkitts(Raji)18
MedullaOblongata12.3
OccipitalLobe13.95
OlfactoryBulb9.85
Ovary8.5
Pancreas18.5
PancreaticIslet30.75
ParietalLobe17.8
Pituitary18.75
Placenta11.95
Pons18.6
PrefrontalCortex14.85
Prostate19.75
Salivarygland11.25
SkeletalMuscle24.75
Skin13.2
SmoothMuscle13.65
Spinalcord14.35
SubthalamicNucleus13.75
SuperiorCervicalGanglion17.8
TemporalLobe15.7
Testis11.15
TestisGermCell10.6
TestisIntersitial15.55
TestisLeydigCell27.35
TestisSeminiferousTubule11.4
Thalamus14.95
Thymus9.25
Thyroid13.45
Tongue18.5
Tonsil14.55
Trachea11.15
TrigeminalGanglion18.7
Uterus8.75
UterusCorpus10.7
WholeBlood12.2
Wholebrain9.95
colon12.6
pineal_day15.08
pineal_night14.18
retina14.85
small_intestine12.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P88079
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.6 ± 0.67
Basal Forebrain6.59 ± 0.56
Basal Part of Pons6.46 ± 0.47
Cerebellar Cortex6.07 ± 0.52
Cerebellar Nuclei6.74 ± 0.36
Claustrum7.2 ± 0.78
Epithalamus5.5 ± 0.62
Frontal Lobe6.39 ± 0.67
Globus Pallidus6.96 ± 0.48
Hypothalamus6.13 ± 0.66
Insula6.23 ± 0.83
Limbic Lobe6.54 ± 0.68
Mesencephalon6.6 ± 0.59
Myelencephalon6.49 ± 0.68
Occipital Lobe6.5 ± 0.76
Parietal Lobe6.4 ± 0.62
Pontine Tegmentum6.31 ± 0.53
Striatum6.66 ± 0.62
Subthalamus6.12 ± 0.11
Temporal Lobe6.35 ± 0.67
Thalamus6.5 ± 0.55
White Matter6.72 ± 0.47
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Muc6CBCerebellum8.02
9.62
Muc6CTXCerebral cortex1.66
2.04
Muc6HIPHippocampal region1.86
1.72
Muc6HPFHippocampal formation1.95
1.7
Muc6HYHypothalamus0.54
0.59
Muc6LSXLateral septal complex1.57
1.3
Muc6MBMidbrain0.92
1.15
Muc6MYMedulla4.61
4.81
Muc6OLFOlfactory bulb2.77
2
Muc6PPons3.62
4.87
Muc6PALPallidum4.09
8
Muc6RHPRetrohippocampal region1.95
1.56
Muc6sAMYStriatum-like amygdalar nuclei1.49
1.1
Muc6STRStriatum0.93
0.79
Muc6STRdStriatum dorsal region0.66
0.68
Muc6STRvStriatum ventral region1.25
0.81
Muc6THThalamus0.42
0.84
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved