Annotation Detail for MYO9B
Basic Information Top
| Gene Symbol: | MYO9B ( CELIAC4,MYR5 ) |
|---|---|
| Gene Full Name: | myosin IXB |
| Band: | 19p13.11 |
| Quick Links | Entrez ID:4650; OMIM: 602129; Uniprot ID:B0I1T6_HUMAN; ENSEMBL ID: ENSG00000099331; HGNC ID: 7609 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.123198
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 9 / 70761 | 127 |  |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 25 / 564012 | 44 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 131 / 1939121 | 67 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 2 / 17475 | 114 | |
| breast (mammary gland) tumor | 7 / 94178 | 74 | |
| cervical tumor | 4 / 34366 | 116 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 13 / 263845 | 49 | |
| glioma | 7 / 106883 | 65 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 8 / 68959 | 116 | |
| leukemia | 24 / 95842 | 250 |  |
| liver tumor | 1 / 96359 | 10 |  |
| lung tumor | 6 / 103127 | 58 | |
| lymphoma | 9 / 71755 | 125 | |
| non-neoplasia | 6 / 97250 | 61 | |
| normal | 149 / 3360307 | 44 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 11 / 104616 | 105 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 5 / 102680 | 48 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 23 / 124949 | 184 | |
| soft tissue/muscle tissue tumor | 15 / 125191 | 119 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 2 / 29757 | 67 | |
| blood | 14 / 123478 | 113 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 38 / 1100989 | 34 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 13 / 215722 | 60 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 17 / 211054 | 80 | |
| heart | 3 / 89626 | 33 | |
| intestine | 13 / 234472 | 55 | |
| kidney | 12 / 211777 | 56 | |
| larynx | 1 / 24145 | 41 | |
| liver | 2 / 207743 | 9 | |
| lung | 19 / 336974 | 56 | |
| lymph | 6 / 44270 | 135 | |
| lymph node | 22 / 91610 | 240 | |
| mammary gland | 14 / 153271 | 91 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 21 / 214812 | 97 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 5 / 280825 | 17 | |
| prostate | 7 / 189345 | 36 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 26 / 210574 | 123 | |
| spleen | 7 / 53952 | 129 | |
| stomach | 3 / 96619 | 31 | |
| testis | 8 / 330442 | 24 | |
| thymus | 7 / 81131 | 86 | |
| thyroid | 6 / 47473 | 126 | |
| tonsil | 3 / 16999 | 176 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 15 / 232878 | 64 | |
| vascular | 1 / 51780 | 19 | |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 214780_s_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 75.25 | |
| Adipocyte | 33.4 | |
| AdrenalCortex | 35 | |
| Adrenalgland | 28.85 | |
| Amygdala | 36.2 | |
| Appendix | 33.7 | |
| AtrioventricularNode | 24.9 | |
| BDCA4+_DentriticCells | 49.7 | |
| Bonemarrow | 35.6 | |
| BronchialEpithelialCells | 32.1 | |
| CD105+_Endothelial | 31.35 | |
| CD14+_Monocytes | 138.75 | |
| CD19+_BCells(neg._sel.) | 50.55 | |
| CD33+_Myeloid | 131.7 | |
| CD34+ | 45.05 | |
| CD4+_Tcells | 105.65 | |
| CD56+_NKCells | 70.35 | |
| CD71+_EarlyErythroid | 28.1 | |
| CD8+_Tcells | 106.95 | |
| CardiacMyocytes | 43.4 | |
| Caudatenucleus | 31.2 | |
| Cerebellum | 27.2 | |
| CerebellumPeduncles | 43.15 | |
| CiliaryGanglion | 23.8 | |
| CingulateCortex | 35.2 | |
| Colorectaladenocarcinoma | 30.3 | |
| DorsalRootGanglion | 24.9 | |
| FetalThyroid | 32.9 | |
| Fetalbrain | 34.6 | |
| Fetalliver | 28.7 | |
| Fetallung | 26.5 | |
| GlobusPallidus | 24.95 | |
| Heart | 41.35 | |
| Hypothalamus | 38.55 | |
| Kidney | 27 | |
| Leukemia_chronicMyelogenousK-562 | 31.25 | |
| Leukemia_promyelocytic-HL-60 | 28.95 | |
| Leukemialymphoblastic(MOLT-4) | 38.55 | |
| Liver | 44.3 | |
| Lung | 39.7 | |
| Lymphnode | 36.6 | |
| Lymphoma_burkitts(Daudi) | 54.75 | |
| Lymphoma_burkitts(Raji) | 47 | |
| MedullaOblongata | 42.8 | |
| OccipitalLobe | 35.25 | |
| OlfactoryBulb | 29.05 | |
| Ovary | 21.95 | |
| Pancreas | 28.45 | |
| PancreaticIslet | 35.9 | |
| ParietalLobe | 40.25 | |
| Pituitary | 40.2 | |
| Placenta | 33.85 | |
| Pons | 50.2 | |
| PrefrontalCortex | 35.1 | |
| Prostate | 39.35 | |
| Salivarygland | 27.35 | |
| SkeletalMuscle | 38.3 | |
| Skin | 25.55 | |
| SmoothMuscle | 39.35 | |
| Spinalcord | 57.5 | |
| SubthalamicNucleus | 30.2 | |
| SuperiorCervicalGanglion | 38.15 | |
| TemporalLobe | 32.25 | |
| Testis | 29.4 | |
| TestisGermCell | 38.1 | |
| TestisIntersitial | 28.9 | |
| TestisLeydigCell | 33.3 | |
| TestisSeminiferousTubule | 31.6 | |
| Thalamus | 47.75 | |
| Thymus | 30.8 | |
| Thyroid | 43.2 | |
| Tongue | 32.65 | |
| Tonsil | 33.7 | |
| Trachea | 28.15 | |
| TrigeminalGanglion | 33.95 | |
| Uterus | 26.85 | |
| UterusCorpus | 30.1 | |
| WholeBlood | 69.75 | |
| Wholebrain | 26.75 | |
| colon | 35.1 | |
| pineal_day | 43.86 | |
| pineal_night | 41.92 | |
| retina | 42.825 | |
| small_intestine | 44.15 | |
- Probe name: A_24_P246173
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.55 ± 0.39 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.06 ± 0.3 | |
| Basal Part of Pons | 6.07 ± 0.64 | |
| Cerebellar Cortex | 6.2 ± 0.33 | |
| Cerebellar Nuclei | 6.83 ± 0.32 | |
| Claustrum | 5.74 ± 0.52 | |
| Epithalamus | 5.92 ± 0.59 | |
| Frontal Lobe | 6.04 ± 0.55 | |
| Globus Pallidus | 7.08 ± 0.25 | |
| Hypothalamus | 5.79 ± 0.37 | |
| Insula | 5.85 ± 0.26 | |
| Limbic Lobe | 5.85 ± 0.5 | |
| Mesencephalon | 6.07 ± 0.61 | |
| Myelencephalon | 6.13 ± 0.49 | |
| Occipital Lobe | 6.38 ± 0.47 | |
| Parietal Lobe | 6.03 ± 0.43 | |
| Pontine Tegmentum | 6.12 ± 0.41 | |
| Striatum | 6 ± 0.53 | |
| Subthalamus | 6.35 ± 0.28 | |
| Temporal Lobe | 5.95 ± 0.42 | |
| Thalamus | 6.23 ± 0.34 | |
| White Matter | 8.07 ± 0.13 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Myo9b | CB | Cerebellum | 29.72 | |
| 46.83 | | |||
| Myo9b | CTX | Cerebral cortex | 78.67 | |
| 67.23 | | |||
| Myo9b | HIP | Hippocampal region | 40.83 | |
| 60.43 | | |||
| Myo9b | HPF | Hippocampal formation | 53.79 | |
| 65.5 | | |||
| Myo9b | HY | Hypothalamus | 13.74 | |
| 11.06 | | |||
| Myo9b | LSX | Lateral septal complex | 11.16 | |
| 8.22 | | |||
| Myo9b | MB | Midbrain | 12.75 | |
| 11.56 | | |||
| Myo9b | MY | Medulla | 13.68 | |
| 14.2 | | |||
| Myo9b | OLF | Olfactory bulb | 56.22 | |
| 56.04 | | |||
| Myo9b | P | Pons | 9.46 | |
| 9.27 | | |||
| Myo9b | PAL | Pallidum | 11.31 | |
| 11.72 | | |||
| Myo9b | RHP | Retrohippocampal region | 75.59 | |
| 74.02 | | |||
| Myo9b | sAMY | Striatum-like amygdalar nuclei | 57.46 | |
| 50.52 | | |||
| Myo9b | STR | Striatum | 31.52 | |
| 25.73 | | |||
| Myo9b | STRd | Striatum dorsal region | 33.38 | |
| 27.2 | | |||
| Myo9b | STRv | Striatum ventral region | 14.22 | |
| 10.69 | | |||
| Myo9b | TH | Thalamus | 17.99 | |
| 14.71 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00043333 | 9 | 1513 | 1521 | YLDEFLLNK | Peptide Atlas |