AutismKB 2.0

Annotation Detail for NAB1


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Basic Information Top
Gene Symbol:NAB1 ( - )
Gene Full Name: NGFI-A binding protein 1 (EGR1 binding protein 1)
Band: 2q32.2
Quick LinksEntrez ID:4664; OMIM: 600800; Uniprot ID:NAB1_HUMAN; ENSEMBL ID: ENSG00000138386; HGNC ID: 7626
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus7 / 56401212
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult12 / 19391216
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor1 / 3436629
chondrosarcoma0 / 828230 
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor1 / 2638453
glioma0 / 1068830 
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor1 / 9635910
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal17 / 33603075
ovarian tumor2 / 7668226
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone1 / 7165513
bone marrow0 / 488010 
brain1 / 11009890 
cervix1 / 4817120
connective tissue0 / 1492550 
ear1 / 1621261
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine2 / 2344728
kidney1 / 2117774
larynx0 / 241450 
liver2 / 2077439
lung3 / 3369748
lymph0 / 442700 
lymph node2 / 9161021
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary2 / 10205119
pancreas2 / 2148129
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate2 / 18934510
salivary gland0 / 201550 
skin1 / 2105744
spleen0 / 539520 
stomach0 / 966190 
testis2 / 3304426
thymus0 / 811310 
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 208047_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts10.4
Adipocyte11.3
AdrenalCortex23.95
Adrenalgland12.3
Amygdala10.35
Appendix25.85
AtrioventricularNode24.45
BDCA4+_DentriticCells9.7
Bonemarrow17.3
BronchialEpithelialCells10.65
CD105+_Endothelial11.95
CD14+_Monocytes14.35
CD19+_BCells(neg._sel.)12.05
CD33+_Myeloid14.25
CD34+13.7
CD4+_Tcells10.95
CD56+_NKCells12.4
CD71+_EarlyErythroid12.45
CD8+_Tcells9.7
CardiacMyocytes42.45
Caudatenucleus10.8
Cerebellum10.3
CerebellumPeduncles18.55
CiliaryGanglion19.45
CingulateCortex14.05
Colorectaladenocarcinoma11.7
DorsalRootGanglion16.8
FetalThyroid20.25
Fetalbrain11
Fetalliver11.3
Fetallung7.95
GlobusPallidus12.65
Heart29.7
Hypothalamus11.1
Kidney13.55
Leukemia_chronicMyelogenousK-56210.35
Leukemia_promyelocytic-HL-6010.35
Leukemialymphoblastic(MOLT-4)8.2
Liver25.4
Lung12.85
Lymphnode8.8
Lymphoma_burkitts(Daudi)17.5
Lymphoma_burkitts(Raji)21.95
MedullaOblongata9.7
OccipitalLobe11.1
OlfactoryBulb8.9
Ovary15.5
Pancreas12.35
PancreaticIslet14.35
ParietalLobe16.45
Pituitary14.35
Placenta10.75
Pons13.85
PrefrontalCortex13
Prostate12.75
Salivarygland12
SkeletalMuscle31.3
Skin18.6
SmoothMuscle13.9
Spinalcord12.15
SubthalamicNucleus14.25
SuperiorCervicalGanglion31.2
TemporalLobe12.85
Testis9.95
TestisGermCell8.9
TestisIntersitial11.85
TestisLeydigCell15.45
TestisSeminiferousTubule10.75
Thalamus13.85
Thymus8.15
Thyroid12.65
Tongue21.4
Tonsil13.05
Trachea9.9
TrigeminalGanglion25
Uterus10.95
UterusCorpus16.9
WholeBlood12.95
Wholebrain8.5
colon12.15
pineal_day13.86
pineal_night16.04
retina14.675
small_intestine10.6
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P209805
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala9.06 ± 0.3
Basal Forebrain9.03 ± 0.1
Basal Part of Pons9.13 ± 0.19
Cerebellar Cortex9.15 ± 0.13
Cerebellar Nuclei8.98 ± 0.21
Claustrum8.73 ± 0.25
Epithalamus8.92 ± 0.41
Frontal Lobe8.68 ± 0.28
Globus Pallidus8.84 ± 0.21
Hypothalamus8.6 ± 0.18
Insula8.69 ± 0.21
Limbic Lobe9 ± 0.33
Mesencephalon8.72 ± 0.36
Myelencephalon8.8 ± 0.38
Occipital Lobe9.29 ± 0.37
Parietal Lobe8.88 ± 0.27
Pontine Tegmentum8.65 ± 0.26
Striatum8.14 ± 0.3
Subthalamus8.67 ± 0.02
Temporal Lobe8.79 ± 0.27
Thalamus8.42 ± 0.25
White Matter9.17 ± 0.09
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Nab1CBCerebellum38.36
50.37
Nab1CTXCerebral cortex28.55
22.11
Nab1HIPHippocampal region22.09
27.4
Nab1HPFHippocampal formation33.9
36.16
Nab1HYHypothalamus9.94
8.92
Nab1LSXLateral septal complex76.89
71.67
Nab1MBMidbrain12.07
13.18
Nab1MYMedulla21.94
31.41
Nab1OLFOlfactory bulb78.24
86.84
Nab1PPons23.36
31.13
Nab1PALPallidum21.3
23.92
Nab1RHPRetrohippocampal region53.98
48.71
Nab1sAMYStriatum-like amygdalar nuclei29.76
23.38
Nab1STRStriatum15.11
13.59
Nab1STRdStriatum dorsal region5.66
5.39
Nab1STRvStriatum ventral region18.72
17.07
Nab1THThalamus30.6
27.27
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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