AutismKB 2.0

Annotation Detail for NDUFB7


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Basic Information Top
Gene Symbol:NDUFB7 ( B18,CI-B18,MGC2480 )
Gene Full Name: NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa
Band: 19p13.12
Quick LinksEntrez ID:4713; OMIM: 603842; Uniprot ID:NDUB7_HUMAN; ENSEMBL ID: ENSG00000099795; HGNC ID: 7702
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body4 / 7076156
blastocyst2 / 6231932
fetus15 / 56401226
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult96 / 193912149
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor1 / 3436629
chondrosarcoma1 / 8282312
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor6 / 11936950
germ cell tumor11 / 26384541
glioma8 / 10688374
head and neck tumor3 / 13630222
kidney tumor0 / 689590 
leukemia3 / 9584231
liver tumor5 / 9635951
lung tumor4 / 10312738
lymphoma4 / 7175555
non-neoplasia2 / 9725020
normal137 / 336030740
ovarian tumor8 / 76682104
pancreatic tumor8 / 10461676
primitive neuroectodermal tumor of the CNS4 / 12568031
prostate cancer8 / 10268077
retinoblastoma1 / 4635621
skin tumor12 / 12494996
soft tissue/muscle tissue tumor4 / 12519131
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites4 / 4001599
bladder1 / 2975733
blood3 / 12347824
bone3 / 7165541
bone marrow2 / 4880140
brain31 / 110098928
cervix1 / 4817120
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue12 / 21572255
esophagus0 / 202090 
eye12 / 21105456
heart2 / 8962622
intestine4 / 23447217
kidney4 / 21177718
larynx0 / 241450 
liver15 / 20774372
lung11 / 33697432
lymph4 / 4427090
lymph node2 / 9161021
mammary gland3 / 15327119
mouth0 / 670520 
muscle8 / 10771574
nerve0 / 157680 
ovary11 / 102051107
pancreas11 / 21481251
parathyroid1 / 2053948
pharynx1 / 4132824
pituitary gland3 / 16585180
placenta9 / 28082532
prostate17 / 18934589
salivary gland2 / 2015599
skin17 / 21057480
spleen1 / 5395218
stomach3 / 9661931
testis7 / 33044221
thymus0 / 811310 
thyroid0 / 474730 
tonsil1 / 1699958
trachea0 / 524130 
umbilical cord0 / 136800 
uterus6 / 23287825
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 202839_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts221.75
Adipocyte75.5
AdrenalCortex87.05
Adrenalgland81.45
Amygdala101.35
Appendix49.95
AtrioventricularNode45.7
BDCA4+_DentriticCells203.7
Bonemarrow41.75
BronchialEpithelialCells215.1
CD105+_Endothelial226.45
CD14+_Monocytes157.75
CD19+_BCells(neg._sel.)89.2
CD33+_Myeloid133.85
CD34+189.7
CD4+_Tcells97.45
CD56+_NKCells337.25
CD71+_EarlyErythroid190
CD8+_Tcells92.35
CardiacMyocytes112.65
Caudatenucleus81.4
Cerebellum69.85
CerebellumPeduncles113.1
CiliaryGanglion25.65
CingulateCortex96.75
Colorectaladenocarcinoma127.9
DorsalRootGanglion59.4
FetalThyroid75.2
Fetalbrain50.15
Fetalliver48.1
Fetallung49.7
GlobusPallidus45.3
Heart3105.2
Hypothalamus132.95
Kidney123.65
Leukemia_chronicMyelogenousK-56284.55
Leukemia_promyelocytic-HL-6099.85
Leukemialymphoblastic(MOLT-4)58.6
Liver926.55
Lung331.5
Lymphnode31.3
Lymphoma_burkitts(Daudi)94.85
Lymphoma_burkitts(Raji)309.95
MedullaOblongata68.1
OccipitalLobe77.7
OlfactoryBulb55.7
Ovary15.7
Pancreas63.65
PancreaticIslet68.35
ParietalLobe66.1
Pituitary87.8
Placenta70.75
Pons60.9
PrefrontalCortex145.75
Prostate331.2
Salivarygland36.55
SkeletalMuscle100.65
Skin49.7
SmoothMuscle112.05
Spinalcord68.9
SubthalamicNucleus67.8
SuperiorCervicalGanglion26
TemporalLobe98.55
Testis113.45
TestisGermCell65.25
TestisIntersitial33.3
TestisLeydigCell55.6
TestisSeminiferousTubule53.05
Thalamus88.45
Thymus115
Thyroid463.35
Tongue74.35
Tonsil53.85
Trachea68.05
TrigeminalGanglion43.05
Uterus152.15
UterusCorpus29.2
WholeBlood65.35
Wholebrain420.65
colon398.95
pineal_day223.26
pineal_night224.7
retina164.375
small_intestine276.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P50872
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala9.65 ± 0.26
Basal Forebrain9.77 ± 0.16
Basal Part of Pons10.08 ± 0.3
Cerebellar Cortex9.76 ± 0.3
Cerebellar Nuclei10.12 ± 0.24
Claustrum9.33 ± 0.5
Epithalamus9.85 ± 0.21
Frontal Lobe9.96 ± 0.36
Globus Pallidus9.94 ± 0.34
Hypothalamus10.2 ± 0.17
Insula9.94 ± 0.37
Limbic Lobe9.56 ± 0.47
Mesencephalon9.84 ± 0.47
Myelencephalon9.75 ± 0.46
Occipital Lobe9.29 ± 0.39
Parietal Lobe9.78 ± 0.37
Pontine Tegmentum9.82 ± 0.34
Striatum9.61 ± 0.37
Subthalamus10.41 ± 0.06
Temporal Lobe9.9 ± 0.37
Thalamus9.87 ± 0.31
White Matter9.32 ± 0.46
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Ndufb7CBCerebellum100
100
Ndufb7CTXCerebral cortex100
100
Ndufb7HIPHippocampal region100
100
Ndufb7HPFHippocampal formation100
100
Ndufb7HYHypothalamus100
100
Ndufb7LSXLateral septal complex100
100
Ndufb7MBMidbrain100
100
Ndufb7MYMedulla94.44
100
Ndufb7OLFOlfactory bulb100
100
Ndufb7PPons92.51
100
Ndufb7PALPallidum100
100
Ndufb7RHPRetrohippocampal region100
100
Ndufb7sAMYStriatum-like amygdalar nuclei100
100
Ndufb7STRStriatum100
100
Ndufb7STRdStriatum dorsal region100
100
Ndufb7STRvStriatum ventral region100
100
Ndufb7THThalamus100
100
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00001794 10 72 81 DSFPNFLACK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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