Annotation Detail for NDUFB9
Basic Information Top
| Gene Symbol: | NDUFB9 ( B22,DKFZp566O173,FLJ22885,LYRM3,UQOR22 ) |
|---|---|
| Gene Full Name: | NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa |
| Band: | 8q24.13 |
| Quick Links | Entrez ID:4715; OMIM: 601445; Uniprot ID:NDUB9_HUMAN; ENSEMBL ID: ENSG00000147684; HGNC ID: 7704 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.15977
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 3 / 62319 | 48 | |
| fetus | 38 / 564012 | 67 |  |
| neonate | 6 / 31097 | 192 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 3 / 55556 | 53 | |
| adult | 176 / 1939121 | 90 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 5 / 12794 | 390 |  |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 17 / 94178 | 180 | |
| cervical tumor | 7 / 34366 | 203 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 12 / 114246 | 105 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 35 / 119369 | 293 | |
| germ cell tumor | 18 / 263845 | 68 | |
| glioma | 7 / 106883 | 65 | |
| head and neck tumor | 16 / 136302 | 117 | |
| kidney tumor | 9 / 68959 | 130 | |
| leukemia | 12 / 95842 | 125 | |
| liver tumor | 6 / 96359 | 62 | |
| lung tumor | 18 / 103127 | 174 | |
| lymphoma | 5 / 71755 | 69 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 283 / 3360307 | 84 | |
| ovarian tumor | 17 / 76682 | 221 | |
| pancreatic tumor | 13 / 104616 | 124 | |
| primitive neuroectodermal tumor of the CNS | 28 / 125680 | 222 | |
| prostate cancer | 8 / 102680 | 77 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 78 / 124949 | 624 | |
| soft tissue/muscle tissue tumor | 15 / 125191 | 119 | |
| uterine tumor | 5 / 90257 | 55 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 5 / 33197 | 150 | |
| ascites | 5 / 40015 | 124 | |
| bladder | 1 / 29757 | 33 | |
| blood | 19 / 123478 | 153 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 11 / 48801 | 225 | |
| brain | 106 / 1100989 | 96 | |
| cervix | 8 / 48171 | 166 | |
| connective tissue | 5 / 149255 | 33 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 11 / 215722 | 50 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 12 / 211054 | 56 | |
| heart | 7 / 89626 | 78 | |
| intestine | 17 / 234472 | 72 | |
| kidney | 22 / 211777 | 103 | |
| larynx | 4 / 24145 | 165 | |
| liver | 15 / 207743 | 72 | |
| lung | 38 / 336974 | 112 | |
| lymph | 5 / 44270 | 112 | |
| lymph node | 27 / 91610 | 294 | |
| mammary gland | 22 / 153271 | 143 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 32 / 107715 | 297 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 18 / 102051 | 176 | |
| pancreas | 50 / 214812 | 232 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 8 / 41328 | 193 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 17 / 280825 | 60 | |
| prostate | 20 / 189345 | 105 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 81 / 210574 | 384 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 6 / 96619 | 62 | |
| testis | 22 / 330442 | 66 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 9 / 47473 | 189 | |
| tonsil | 7 / 16999 | 411 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 6 / 13680 | 438 | |
| uterus | 19 / 232878 | 81 | |
| vascular | 3 / 51780 | 57 | |
Microarray in - Probe name: A_24_P154006
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 12.69 ± 0.26 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 12.72 ± 0.28 | |
| Basal Part of Pons | 13.12 ± 0.15 | |
| Cerebellar Cortex | 12.43 ± 0.21 | |
| Cerebellar Nuclei | 13.28 ± 0.25 | |
| Claustrum | 12.4 ± 0.54 | |
| Epithalamus | 12.49 ± 0.4 | |
| Frontal Lobe | 12.93 ± 0.35 | |
| Globus Pallidus | 13.34 ± 0.57 | |
| Hypothalamus | 12.89 ± 0.29 | |
| Insula | 12.79 ± 0.34 | |
| Limbic Lobe | 12.42 ± 0.53 | |
| Mesencephalon | 12.79 ± 0.58 | |
| Myelencephalon | 12.72 ± 0.45 | |
| Occipital Lobe | 12.26 ± 0.49 | |
| Parietal Lobe | 12.95 ± 0.4 | |
| Pontine Tegmentum | 12.8 ± 0.48 | |
| Striatum | 12.62 ± 0.4 | |
| Subthalamus | 13.77 ± 0.03 | |
| Temporal Lobe | 12.8 ± 0.36 | |
| Thalamus | 12.91 ± 0.35 | |
| White Matter | 12.75 ± 0.12 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ndufb9 | CB | Cerebellum | 23.02 | |
| 38.86 | | |||
| Ndufb9 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Ndufb9 | HIP | Hippocampal region | 67.64 | |
| 100 | | |||
| Ndufb9 | HPF | Hippocampal formation | 83.41 | |
| 100 | | |||
| Ndufb9 | HY | Hypothalamus | 88.33 | |
| 86.81 | | |||
| Ndufb9 | LSX | Lateral septal complex | 79.94 | |
| 68.39 | | |||
| Ndufb9 | MB | Midbrain | 60.74 | |
| 74.89 | | |||
| Ndufb9 | MY | Medulla | 46.1 | |
| 79.32 | | |||
| Ndufb9 | OLF | Olfactory bulb | 95.34 | |
| 100 | | |||
| Ndufb9 | P | Pons | 57.1 | |
| 94.23 | | |||
| Ndufb9 | PAL | Pallidum | 81.73 | |
| 97.46 | | |||
| Ndufb9 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Ndufb9 | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 99.44 | | |||
| Ndufb9 | STR | Striatum | 77.09 | |
| 64.58 | | |||
| Ndufb9 | STRd | Striatum dorsal region | 66.51 | |
| 54.13 | | |||
| Ndufb9 | STRv | Striatum ventral region | 97.28 | |
| 79.33 | | |||
| Ndufb9 | TH | Thalamus | 88.52 | |
| 100 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| NDUB9_HUMAN_1 | 17 | 1 | 17 | AFLASGPYLTHQQKVLR | PRIDE |
| NDUB9_HUMAN_10 | 8 | 10 | 17 | THQQKVLR | PRIDE |
| NDUB9_HUMAN_74 | 19 | 74 | 92 | QHPQPYIFPDSPGGTSYER | PRIDE |
| PAp00006410 | 19 | 75 | 93 | QHPQPYIFPDSPGGTSYER | Peptide Atlas |