Annotation Detail for NPY
Basic Information Top
| Gene Symbol: | NPY ( PYY4 ) |
|---|---|
| Gene Full Name: | neuropeptide Y |
| Band: | 7p15.3 |
| Quick Links | Entrez ID:4852; OMIM: 162640; Uniprot ID:NPY_HUMAN; ENSEMBL ID: ENSG00000122585; HGNC ID: 7955 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.1832
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 4 / 564012 | 7 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 |  |
| adult | 16 / 1939121 | 8 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 32 / 3360307 | 9 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 12 / 1100989 | 10 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 0 / 336974 | 0 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 6 / 15768 | 380 |  |
| ovary | 0 / 102051 | 0 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 11 / 189345 | 58 |  |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 206001_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 5.9 | |
| Adipocyte | 5.4 | |
| AdrenalCortex | 189.95 | |
| Adrenalgland | 28.8 | |
| Amygdala | 299.75 | |
| Appendix | 10.85 | |
| AtrioventricularNode | 5.35 | |
| BDCA4+_DentriticCells | 5.6 | |
| Bonemarrow | 5.35 | |
| BronchialEpithelialCells | 5.25 | |
| CD105+_Endothelial | 5.4 | |
| CD14+_Monocytes | 5.7 | |
| CD19+_BCells(neg._sel.) | 5.7 | |
| CD33+_Myeloid | 6.75 | |
| CD34+ | 6.65 | |
| CD4+_Tcells | 5.45 | |
| CD56+_NKCells | 5.45 | |
| CD71+_EarlyErythroid | 4.75 | |
| CD8+_Tcells | 4.6 | |
| CardiacMyocytes | 6.7 | |
| Caudatenucleus | 164.4 | |
| Cerebellum | 4.5 | |
| CerebellumPeduncles | 6.3 | |
| CiliaryGanglion | 5.05 | |
| CingulateCortex | 13.75 | |
| Colorectaladenocarcinoma | 5 | |
| DorsalRootGanglion | 16.65 | |
| FetalThyroid | 5.2 | |
| Fetalbrain | 333 | |
| Fetalliver | 4.7 | |
| Fetallung | 3.9 | |
| GlobusPallidus | 41.3 | |
| Heart | 7.5 | |
| Hypothalamus | 17.1 | |
| Kidney | 6.35 | |
| Leukemia_chronicMyelogenousK-562 | 5.35 | |
| Leukemia_promyelocytic-HL-60 | 5.65 | |
| Leukemialymphoblastic(MOLT-4) | 4.6 | |
| Liver | 7.45 | |
| Lung | 5.15 | |
| Lymphnode | 4.6 | |
| Lymphoma_burkitts(Daudi) | 7.1 | |
| Lymphoma_burkitts(Raji) | 7.65 | |
| MedullaOblongata | 18.35 | |
| OccipitalLobe | 121 | |
| OlfactoryBulb | 4.5 | |
| Ovary | 4.3 | |
| Pancreas | 4.1 | |
| PancreaticIslet | 207.25 | |
| ParietalLobe | 80.25 | |
| Pituitary | 7.3 | |
| Placenta | 5.1 | |
| Pons | 16 | |
| PrefrontalCortex | 12.15 | |
| Prostate | 4231.2 |  |
| Salivarygland | 4.9 | |
| SkeletalMuscle | 6.55 | |
| Skin | 4.4 | |
| SmoothMuscle | 6.1 | |
| Spinalcord | 7.1 | |
| SubthalamicNucleus | 12.2 | |
| SuperiorCervicalGanglion | 9.55 | |
| TemporalLobe | 12.8 | |
| Testis | 4.4 | |
| TestisGermCell | 4.55 | |
| TestisIntersitial | 4.5 | |
| TestisLeydigCell | 6.1 | |
| TestisSeminiferousTubule | 4.7 | |
| Thalamus | 7.75 | |
| Thymus | 4.15 | |
| Thyroid | 6.35 | |
| Tongue | 5.6 | |
| Tonsil | 5.35 | |
| Trachea | 4.6 | |
| TrigeminalGanglion | 5.6 | |
| Uterus | 4.3 | |
| UterusCorpus | 4.95 | |
| WholeBlood | 5.9 | |
| Wholebrain | 395.2 | |
| colon | 5.5 | |
| pineal_day | 6.02 | |
| pineal_night | 5.44 | |
| retina | 6.575 | |
| small_intestine | 6.1 | |
- Probe name: CUST_16166_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 10.92 ± 1.35 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 10.1 ± 0.84 | |
| Basal Part of Pons | 6.19 ± 0.48 | |
| Cerebellar Cortex | 5.8 ± 1.16 | |
| Cerebellar Nuclei | 5.57 ± 1.17 | |
| Claustrum | 8.58 ± 1.75 | |
| Epithalamus | 6.81 ± 1.41 | |
| Frontal Lobe | 8.84 ± 1.21 | |
| Globus Pallidus | 5.46 ± 4.81 | |
| Hypothalamus | 7.92 ± 1.5 | |
| Insula | 8.82 ± 1.04 | |
| Limbic Lobe | 9.09 ± 1.45 | |
| Mesencephalon | 7.75 ± 1.91 | |
| Myelencephalon | 8.23 ± 2.16 | |
| Occipital Lobe | 6.31 ± 2.31 | |
| Parietal Lobe | 7.83 ± 1.58 | |
| Pontine Tegmentum | 7.85 ± 1.82 | |
| Striatum | 10.27 ± 0.79 | |
| Subthalamus | 7.14 ± 0.75 | |
| Temporal Lobe | 8.11 ± 1.51 | |
| Thalamus | 5.94 ± 1.4 | |
| White Matter | 7.25 ± 2.25 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Npy | CB | Cerebellum | 3.03 | |
| 4.01 | | |||
| Npy | CTX | Cerebral cortex | 19.95 | |
| 38.16 | | |||
| Npy | HIP | Hippocampal region | 12.48 | |
| 31.94 | | |||
| Npy | HPF | Hippocampal formation | 12.76 | |
| 28.53 | | |||
| Npy | HY | Hypothalamus | 5.67 | |
| 9.7 | | |||
| Npy | LSX | Lateral septal complex | 4.83 | |
| 10.94 | | |||
| Npy | MB | Midbrain | 4.39 | |
| 7.49 | | |||
| Npy | MY | Medulla | 4.17 | |
| 6.4 | | |||
| Npy | OLF | Olfactory bulb | 19.79 | |
| 32.86 | | |||
| Npy | P | Pons | 1.38 | |
| 1.7 | | |||
| Npy | PAL | Pallidum | 5.51 | |
| 11.07 | | |||
| Npy | RHP | Retrohippocampal region | 12.87 | |
| 23.22 | | |||
| Npy | sAMY | Striatum-like amygdalar nuclei | 12.47 | |
| 22.16 | | |||
| Npy | STR | Striatum | 9.22 | |
| 21.56 | | |||
| Npy | STRd | Striatum dorsal region | 8.35 | |
| 21.73 | | |||
| Npy | STRv | Striatum ventral region | 11.77 | |
| 24.18 | | |||
| Npy | TH | Thalamus | 3.91 | |
| 6.27 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00137371 | 13 | 68 | 80 | SSPETLISDLLMR | Peptide Atlas |