Annotation Detail for NTF4
Basic Information Top
| Gene Symbol: | NTF4 ( GLC10,GLC1O,NT-4/5,NT4,NT5,NTF5 ) |
|---|---|
| Gene Full Name: | neurotrophin 4 |
| Band: | 19q13.3 |
| Quick Links | Entrez ID:4909; OMIM: 162662; Uniprot ID:NTF4_HUMAN; ENSEMBL ID: ENSG00000167744; HGNC ID: 8024 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.266902
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 0 / 564012 | 0 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 5 / 1939121 | 2 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 9 / 3360307 | 2 | |
| ovarian tumor | 1 / 76682 | 13 |  |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 0 / 1100989 | 0 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 5 / 336974 | 14 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_11268_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.5 ± 1.01 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.29 ± 0.19 | |
| Basal Part of Pons | 2.97 ± 0.5 | |
| Cerebellar Cortex | 2.81 ± 0.74 | |
| Cerebellar Nuclei | 3.41 ± 0.69 | |
| Claustrum | 3.65 ± 0.9 | |
| Epithalamus | 3.19 ± 0.32 | |
| Frontal Lobe | 3.11 ± 0.7 | |
| Globus Pallidus | 3.64 ± 0.63 | |
| Hypothalamus | 3.13 ± 0.89 | |
| Insula | 2.97 ± 0.81 | |
| Limbic Lobe | 3.26 ± 0.65 | |
| Mesencephalon | 3.35 ± 0.76 | |
| Myelencephalon | 3.26 ± 0.69 | |
| Occipital Lobe | 3.49 ± 0.73 | |
| Parietal Lobe | 3.17 ± 0.72 | |
| Pontine Tegmentum | 2.97 ± 0.79 | |
| Striatum | 3.5 ± 0.61 | |
| Subthalamus | 2.23 ± 0.79 | |
| Temporal Lobe | 3.09 ± 0.74 | |
| Thalamus | 3.24 ± 0.69 | |
| White Matter | 3.75 ± 0.47 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ntf5 | CB | Cerebellum | 89.05 |  |
| 67.06 | | |||
| Ntf5 | CTX | Cerebral cortex | 100 | |
| 88.37 | | |||
| Ntf5 | HIP | Hippocampal region | 75.56 | |
| 72.6 | | |||
| Ntf5 | HPF | Hippocampal formation | 86.51 | |
| 73.89 | | |||
| Ntf5 | HY | Hypothalamus | 86.06 | |
| 59.31 | | |||
| Ntf5 | LSX | Lateral septal complex | 89.79 | |
| 55.31 | | |||
| Ntf5 | MB | Midbrain | 75.73 | |
| 58.76 | | |||
| Ntf5 | MY | Medulla | 77.39 | |
| 78.66 | | |||
| Ntf5 | OLF | Olfactory bulb | 100 | |
| 82.75 | | |||
| Ntf5 | P | Pons | 71.46 | |
| 69.04 | | |||
| Ntf5 | PAL | Pallidum | 60.8 | |
| 46.75 | | |||
| Ntf5 | RHP | Retrohippocampal region | 97.23 | |
| 71.97 | | |||
| Ntf5 | sAMY | Striatum-like amygdalar nuclei | 83.57 | |
| 51.66 | | |||
| Ntf5 | STR | Striatum | 58.53 | |
| 34.33 | | |||
| Ntf5 | STRd | Striatum dorsal region | 46.09 | |
| 26.39 | | |||
| Ntf5 | STRv | Striatum ventral region | 79.11 | |
| 45.34 | | |||
| Ntf5 | TH | Thalamus | 87.24 | |
| 66.97 | |