Annotation Detail for CISD2
Basic Information Top
| Gene Symbol: | CISD2 ( ERIS,Miner1,WFS2,ZCD2 ) |
|---|---|
| Gene Full Name: | CDGSH iron sulfur domain 2 |
| Band: | 4q24 |
| Quick Links | Entrez ID:493856; OMIM: 604928,611507; Uniprot ID:CISD2_HUMAN; ENSEMBL ID: ENSG00000145354; HGNC ID: 24212 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.444955
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 17 / 564012 | 30 | |
| neonate | 2 / 31097 | 64 |  |
| infant | 2 / 23620 | 84 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 51 / 1939121 | 26 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 3 / 34366 | 87 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 12 / 263845 | 45 | |
| glioma | 6 / 106883 | 56 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 4 / 68959 | 58 | |
| leukemia | 1 / 95842 | 10 |  |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 4 / 71755 | 55 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 114 / 3360307 | 33 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 3 / 125680 | 23 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 5 / 33197 | 150 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 3 / 29757 | 100 | |
| blood | 0 / 123478 | 0 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 36 / 1100989 | 32 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 9 / 215722 | 41 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 11 / 211054 | 52 | |
| heart | 3 / 89626 | 33 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 11 / 211777 | 51 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 16 / 336974 | 47 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 6 / 91610 | 65 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 4 / 107715 | 37 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 7 / 280825 | 24 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 9 / 210574 | 42 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 12 / 330442 | 36 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 6 / 232878 | 25 | |
| vascular | 2 / 51780 | 38 | |
Microarray in - Probe name: CUST_13776_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 9.35 ± 0.2 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 9.32 ± 0.22 | |
| Basal Part of Pons | 9.7 ± 0.22 | |
| Cerebellar Cortex | 9.57 ± 0.27 | |
| Cerebellar Nuclei | 9.78 ± 0.4 | |
| Claustrum | 9.49 ± 0.26 | |
| Epithalamus | 9.46 ± 0.37 | |
| Frontal Lobe | 9.57 ± 0.32 | |
| Globus Pallidus | 9.69 ± 0.24 | |
| Hypothalamus | 9.99 ± 0.2 | |
| Insula | 9.52 ± 0.28 | |
| Limbic Lobe | 9.49 ± 0.32 | |
| Mesencephalon | 9.63 ± 0.32 | |
| Myelencephalon | 9.52 ± 0.31 | |
| Occipital Lobe | 9.54 ± 0.24 | |
| Parietal Lobe | 9.67 ± 0.25 | |
| Pontine Tegmentum | 9.65 ± 0.33 | |
| Striatum | 9.05 ± 0.27 | |
| Subthalamus | 9.86 ± 0.3 | |
| Temporal Lobe | 9.61 ± 0.28 | |
| Thalamus | 9.56 ± 0.22 | |
| White Matter | 9.9 ± 0.24 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 1500009M05Rik | CB | Cerebellum | 13.28 | |
| 15.94 | | |||
| 1500009M05Rik | CTX | Cerebral cortex | 10.35 | |
| 7.51 | | |||
| 1500009M05Rik | HIP | Hippocampal region | 18.21 | |
| 18.98 | | |||
| 1500009M05Rik | HPF | Hippocampal formation | 17.11 | |
| 16.04 | | |||
| 1500009M05Rik | HY | Hypothalamus | 16.13 | |
| 14.67 | | |||
| 1500009M05Rik | LSX | Lateral septal complex | 3.31 | |
| 2.27 | | |||
| 1500009M05Rik | MB | Midbrain | 7.43 | |
| 7.2 | | |||
| 1500009M05Rik | MY | Medulla | 15.67 | |
| 20.57 | | |||
| 1500009M05Rik | OLF | Olfactory bulb | 23.74 | |
| 18.4 | | |||
| 1500009M05Rik | P | Pons | 18.18 | |
| 21.23 | | |||
| 1500009M05Rik | PAL | Pallidum | 8.59 | |
| 8.31 | | |||
| 1500009M05Rik | RHP | Retrohippocampal region | 14.87 | |
| 11.4 | | |||
| 1500009M05Rik | sAMY | Striatum-like amygdalar nuclei | 5.85 | |
| 5.86 | | |||
| 1500009M05Rik | STR | Striatum | 4.87 | |
| 4.27 | | |||
| 1500009M05Rik | STRd | Striatum dorsal region | 2.48 | |
| 1.96 | | |||
| 1500009M05Rik | STRv | Striatum ventral region | 12.14 | |
| 10.45 | | |||
| 1500009M05Rik | TH | Thalamus | 8.63 | |
| 7.14 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| CISD2_HUMAN_20 | 12 | 20 | 31 | LPVPESITGFAR | PRIDE |
| CISD2_HUMAN_81 | 14 | 81 | 94 | VVNEINIEDLCLTK | PRIDE |
| PAp00003465 | 15 | 117 | 131 | HNELTGDNVGPLILK | Peptide Atlas |