Annotation Detail for GPX8
Basic Information Top
| Gene Symbol: | GPX8 ( UNQ847 ) |
|---|---|
| Gene Full Name: | glutathione peroxidase 8 (putative) |
| Band: | 5q11.2 |
| Quick Links | Entrez ID:493869; OMIM: NA; Uniprot ID:GPX8_HUMAN; ENSEMBL ID: ENSG00000164294; HGNC ID: 33100 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.289044
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 17 / 70761 | 240 |  |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 21 / 564012 | 37 | |
| neonate | 3 / 31097 | 96 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 81 / 1939121 | 41 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 13 / 82823 | 156 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 10 / 119369 | 83 | |
| germ cell tumor | 19 / 263845 | 72 | |
| glioma | 5 / 106883 | 46 | |
| head and neck tumor | 6 / 136302 | 44 | |
| kidney tumor | 5 / 68959 | 72 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 12 / 97250 | 123 | |
| normal | 134 / 3360307 | 39 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 1 / 29757 | 33 | |
| blood | 0 / 123478 | 0 | |
| bone | 11 / 71655 | 153 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 17 / 1100989 | 15 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 20 / 149255 | 133 | |
| ear | 3 / 16212 | 185 | |
| embryonic tissue | 29 / 215722 | 134 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 5 / 211054 | 23 | |
| heart | 6 / 89626 | 66 | |
| intestine | 4 / 234472 | 17 | |
| kidney | 15 / 211777 | 70 | |
| larynx | 1 / 24145 | 41 | |
| liver | 4 / 207743 | 19 | |
| lung | 10 / 336974 | 29 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 4 / 67052 | 59 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 4 / 214812 | 18 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 23 / 280825 | 81 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 18 / 210574 | 85 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 7 / 96619 | 72 | |
| testis | 25 / 330442 | 75 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 15 / 52413 | 286 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 9 / 232878 | 38 | |
| vascular | 3 / 51780 | 57 | |
Microarray in - Probe name: A_24_P876522
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.44 ± 1.03 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.26 ± 0.63 | |
| Basal Part of Pons | 1.52 ± 0.44 | |
| Cerebellar Cortex | 1.7 ± 0.48 | |
| Cerebellar Nuclei | 2.48 ± 0.67 | |
| Claustrum | 2.74 ± 0.78 | |
| Epithalamus | 4.13 ± 0.68 | |
| Frontal Lobe | 2.05 ± 0.85 | |
| Globus Pallidus | 3.75 ± 0.54 | |
| Hypothalamus | 2.41 ± 0.8 | |
| Insula | 2.06 ± 0.8 | |
| Limbic Lobe | 2.07 ± 0.78 | |
| Mesencephalon | 2.29 ± 0.81 | |
| Myelencephalon | 2.2 ± 0.81 | |
| Occipital Lobe | 2.17 ± 0.86 | |
| Parietal Lobe | 2.12 ± 0.79 | |
| Pontine Tegmentum | 2.33 ± 0.84 | |
| Striatum | 3.03 ± 0.79 | |
| Subthalamus | 2.15 ± 0.57 | |
| Temporal Lobe | 1.94 ± 0.75 | |
| Thalamus | 2.02 ± 0.67 | |
| White Matter | 2.61 ± 0.49 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 2310016C16Rik | CB | Cerebellum | 0.16 | |
| 0.37 | | |||
| 2310016C16Rik | CTX | Cerebral cortex | 4.22 | |
| 3.6 | | |||
| 2310016C16Rik | HIP | Hippocampal region | 4.73 | |
| 6.2 | | |||
| 2310016C16Rik | HPF | Hippocampal formation | 3.88 | |
| 5.44 | | |||
| 2310016C16Rik | HY | Hypothalamus | 5.82 | |
| 5.36 | | |||
| 2310016C16Rik | LSX | Lateral septal complex | 6.98 | |
| 9.94 | | |||
| 2310016C16Rik | MB | Midbrain | 0.78 | |
| 1.7 | | |||
| 2310016C16Rik | MY | Medulla | 1.48 | |
| 2.6 | | |||
| 2310016C16Rik | OLF | Olfactory bulb | 9.23 | |
| 7.47 | | |||
| 2310016C16Rik | P | Pons | 2.36 | |
| 4.74 | | |||
| 2310016C16Rik | PAL | Pallidum | 4.07 | |
| 3.32 | | |||
| 2310016C16Rik | RHP | Retrohippocampal region | 2.18 | |
| 4.25 | | |||
| 2310016C16Rik | sAMY | Striatum-like amygdalar nuclei | 1.51 | |
| 1.45 | | |||
| 2310016C16Rik | STR | Striatum | 3.34 | |
| 3.18 | | |||
| 2310016C16Rik | STRd | Striatum dorsal region | 3.19 | |
| 2.55 | | |||
| 2310016C16Rik | STRv | Striatum ventral region | 3.08 | |
| 3.15 | | |||
| 2310016C16Rik | TH | Thalamus | 3.7 | |
| 3.98 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00500957 | 11 | 129 | 139 | NYGVTFPIFHK | Peptide Atlas |