Annotation Detail for TBC1D25
Basic Information Top
| Gene Symbol: | TBC1D25 ( MG81,MGC126866,MGC126868,MGC149731,MGC149732,OATL1 ) |
|---|---|
| Gene Full Name: | TBC1 domain family, member 25 |
| Band: | Xp11.23 |
| Quick Links | Entrez ID:4943; OMIM: 311240; Uniprot ID:TBC25_HUMAN; ENSEMBL ID: ENSG00000068354; HGNC ID: 8092 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.694353
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 15 / 564012 | 26 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 3 / 55556 | 53 |  |
| adult | 78 / 1939121 | 40 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 11 / 263845 | 41 | |
| glioma | 5 / 106883 | 46 | |
| head and neck tumor | 8 / 136302 | 58 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 5 / 96359 | 51 | |
| lung tumor | 4 / 103127 | 38 | |
| lymphoma | 5 / 71755 | 69 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 130 / 3360307 | 38 | |
| ovarian tumor | 4 / 76682 | 52 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 5 / 125680 | 39 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 1 / 123478 | 8 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 47 / 1100989 | 42 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 10 / 211054 | 47 | |
| heart | 5 / 89626 | 55 | |
| intestine | 4 / 234472 | 17 | |
| kidney | 6 / 211777 | 28 | |
| larynx | 1 / 24145 | 41 | |
| liver | 6 / 207743 | 28 | |
| lung | 19 / 336974 | 56 | |
| lymph | 4 / 44270 | 90 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 4 / 102051 | 39 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 3 / 41328 | 72 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 44 / 280825 | 156 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 4 / 20155 | 198 | |
| skin | 8 / 210574 | 37 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 11 / 330442 | 33 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_23_P159688
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.61 ± 0.53 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.13 ± 0.39 | |
| Basal Part of Pons | 4.55 ± 0.57 | |
| Cerebellar Cortex | 4.75 ± 0.28 | |
| Cerebellar Nuclei | 4.31 ± 0.54 | |
| Claustrum | 4.43 ± 0.57 | |
| Epithalamus | 3.81 ± 0.51 | |
| Frontal Lobe | 4.52 ± 0.48 | |
| Globus Pallidus | 3.43 ± 0.54 | |
| Hypothalamus | 4.01 ± 0.64 | |
| Insula | 4.85 ± 0.47 | |
| Limbic Lobe | 4.6 ± 0.44 | |
| Mesencephalon | 4.39 ± 0.7 | |
| Myelencephalon | 4.35 ± 0.52 | |
| Occipital Lobe | 4.32 ± 0.58 | |
| Parietal Lobe | 4.41 ± 0.46 | |
| Pontine Tegmentum | 4.41 ± 0.54 | |
| Striatum | 4 ± 0.54 | |
| Subthalamus | 4.21 ± 0.18 | |
| Temporal Lobe | 4.49 ± 0.48 | |
| Thalamus | 4.22 ± 0.56 | |
| White Matter | 3.02 ± 0.73 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Oatl1 | CB | Cerebellum | 0.45 | |
| 0.83 | | |||
| Oatl1 | CTX | Cerebral cortex | 0.16 | |
| 0.2 | | |||
| Oatl1 | HIP | Hippocampal region | 0.09 | |
| 0.15 | | |||
| Oatl1 | HPF | Hippocampal formation | 0.09 | |
| 0.13 | | |||
| Oatl1 | HY | Hypothalamus | 0.02 | |
| 0.04 | | |||
| Oatl1 | LSX | Lateral septal complex | 0 | |
| 0 | | |||
| Oatl1 | MB | Midbrain | 0.18 | |
| 0.4 | | |||
| Oatl1 | MY | Medulla | 0.13 | |
| 0.1 | | |||
| Oatl1 | OLF | Olfactory bulb | 0.18 | |
| 0.19 | | |||
| Oatl1 | P | Pons | 0.11 | |
| 0.11 | | |||
| Oatl1 | PAL | Pallidum | 0.04 | |
| 0.02 | | |||
| Oatl1 | RHP | Retrohippocampal region | 0.09 | |
| 0.09 | | |||
| Oatl1 | sAMY | Striatum-like amygdalar nuclei | 0.08 | |
| 0.2 | | |||
| Oatl1 | STR | Striatum | 0.04 | |
| 0.05 | | |||
| Oatl1 | STRd | Striatum dorsal region | 0.02 | |
| 0.04 | | |||
| Oatl1 | STRv | Striatum ventral region | 0.07 | |
| 0.03 | | |||
| Oatl1 | TH | Thalamus | 0.32 | |
| 0.58 | |