AutismKB 2.0

Annotation Detail for OMG


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Basic Information Top
Gene Symbol:OMG ( OMGP )
Gene Full Name: oligodendrocyte myelin glycoprotein
Band: 17q11.2
Quick LinksEntrez ID:4974; OMIM: 164345; Uniprot ID:OMGP_HUMAN; ENSEMBL ID: ENSG00000126861; HGNC ID: 8135
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus9 / 56401215
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult139 / 193912171
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor11 / 68959159
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia69 / 97250709
normal361 / 3360307107
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain450 / 1100989408
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye4 / 21105418
heart0 / 896260 
intestine0 / 2344720 
kidney11 / 21177751
larynx0 / 241450 
liver2 / 2077439
lung6 / 33697417
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus1 / 8113112
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 207093_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.8
Adipocyte6.85
AdrenalCortex8.15
Adrenalgland6.05
Amygdala710.2
Appendix13.5
AtrioventricularNode6.6
BDCA4+_DentriticCells6.85
Bonemarrow8.15
BronchialEpithelialCells6.2
CD105+_Endothelial6.5
CD14+_Monocytes6.75
CD19+_BCells(neg._sel.)7.1
CD33+_Myeloid7.9
CD34+7.8
CD4+_Tcells7
CD56+_NKCells7.75
CD71+_EarlyErythroid6.4
CD8+_Tcells5.9
CardiacMyocytes9.5
Caudatenucleus471.8
Cerebellum18.95
CerebellumPeduncles18.1
CiliaryGanglion6.25
CingulateCortex391.65
Colorectaladenocarcinoma6.7
DorsalRootGanglion5.7
FetalThyroid8
Fetalbrain27.95
Fetalliver6.65
Fetallung5
GlobusPallidus134.6
Heart12.15
Hypothalamus975.35
Kidney6.25
Leukemia_chronicMyelogenousK-5626.1
Leukemia_promyelocytic-HL-606.2
Leukemialymphoblastic(MOLT-4)5.25
Liver9.95
Lung7.4
Lymphnode6.25
Lymphoma_burkitts(Daudi)9.1
Lymphoma_burkitts(Raji)9.85
MedullaOblongata490.6
OccipitalLobe659.85
OlfactoryBulb9.4
Ovary4.85
Pancreas5.6
PancreaticIslet7.25
ParietalLobe485.8
Pituitary12
Placenta6.5
Pons143.7
PrefrontalCortex648.9
Prostate7.85
Salivarygland9.6
SkeletalMuscle9.9
Skin6.35
SmoothMuscle7.5
Spinalcord377.45
SubthalamicNucleus238.5
SuperiorCervicalGanglion19.65
TemporalLobe155.85
Testis5.7
TestisGermCell5.4
TestisIntersitial7.1
TestisLeydigCell7.15
TestisSeminiferousTubule5.75
Thalamus660.85
Thymus5.05
Thyroid7.9
Tongue7.25
Tonsil6.7
Trachea5.5
TrigeminalGanglion13.8
Uterus5.5
UterusCorpus6.95
WholeBlood7.4
Wholebrain405.85
colon6.8
pineal_day22.82
pineal_night16.86
retina228.425
small_intestine6.3
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_13633_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.86 ± 0.37
Basal Forebrain6.9 ± 0.2
Basal Part of Pons7.23 ± 0.27
Cerebellar Cortex6.38 ± 0.27
Cerebellar Nuclei7.13 ± 0.29
Claustrum6.37 ± 0.51
Epithalamus6 ± 0.67
Frontal Lobe6.87 ± 0.4
Globus Pallidus7.42 ± 0.29
Hypothalamus6.71 ± 0.58
Insula6.62 ± 0.3
Limbic Lobe6.73 ± 0.33
Mesencephalon6.8 ± 0.39
Myelencephalon6.85 ± 0.45
Occipital Lobe6.77 ± 0.31
Parietal Lobe6.9 ± 0.38
Pontine Tegmentum6.89 ± 0.35
Striatum6.9 ± 0.48
Subthalamus6.75 ± 0.55
Temporal Lobe6.84 ± 0.31
Thalamus7.09 ± 0.32
White Matter8.32 ± 0.27
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
OmgCBCerebellum67.38
100
OmgCTXCerebral cortex100
100
OmgHIPHippocampal region100
100
OmgHPFHippocampal formation100
100
OmgHYHypothalamus100
100
OmgLSXLateral septal complex100
100
OmgMBMidbrain100
100
OmgMYMedulla100
100
OmgOLFOlfactory bulb100
100
OmgPPons100
100
OmgPALPallidum100
100
OmgRHPRetrohippocampal region100
100
OmgsAMYStriatum-like amygdalar nuclei100
100
OmgSTRStriatum100
75.22
OmgSTRdStriatum dorsal region100
65.08
OmgSTRvStriatum ventral region100
71.34
OmgTHThalamus100
91.3
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00063417 16 247 262 AHVIGTPCSTQISSLK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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