AutismKB 2.0

Annotation Detail for OSM


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Basic Information Top
Gene Symbol:OSM ( MGC20461 )
Gene Full Name: oncostatin M
Band: 22q12.2
Quick LinksEntrez ID:5008; OMIM: 165095; Uniprot ID:ONCM_HUMAN; ENSEMBL ID: ENSG00000099985; HGNC ID: 8506
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus2 / 5640123
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult14 / 19391217
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor4 / 10312738
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal11 / 33603073
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood5 / 12347840
bone0 / 716550 
bone marrow0 / 488010 
brain1 / 11009890 
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine2 / 2344728
kidney2 / 2117779
larynx0 / 241450 
liver0 / 2077430 
lung12 / 33697435
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary1 / 1020519
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus1 / 8113112
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: Primary tumors (U95A)
  • Affymatrix Probe ID: 1579_at
Cell line Expression level Expression bar
Pr1T6.79
Pr4T12.297
Pr5T11.69
Pr7T12.351
Pr1N12.681
Pr5N12.091
Pr6T13.864
Pr3N11.821
Pr3T12.395
Pr4N12.077
Pr2N11.446
Pr8N11.713
Pr8T12.871
Pr9N11.017
Pr10N12.391
Pr10T12.776
Pr9T10.253
Pr11T11.969
Pr12T11.82
Pr13AT12.493
Pr13BT12.534
Pr21T11.762
Pr22T12.539
Pr30T13.452
Pr23T13.37
Pr19T12.742
Pr26T12.617
Pr31T12.498
Pr16T12.61
Pr17T12.652
Pr24T11.392
Pr27T9.284
Pr29T10.354
OVR10212.644
HUOVR12.246
G213.567
G313.089
G512.274
G612.63
G811.645
G912.348
CO7T20.554
CO8T12.361
CO15T14.234
CO27T13.214
CO30T17.852
CO32T12.783
CO40T12.915
CO52N16.812
CO62N17.275
K112.287
K212.468
K311.505
K415.556
K14N14.426
K1612.846
K1715.269
K1917.033
K2015.757
K2212.522
CO9T12.484
CO20T14.218
CO24T15.64
CO36N14.179
K1812.592
P1N11.658
P2N12.421
P5N13.319
P812.658
P119.931
P1713.022
K2116.095
K25N14.469
K28N13.662
CO42T13.345
P2210.749
P13N12.003
LU11T12.795
LU16T13.055
LU7T12.342
LU8T12.33
LU12T12.604
LU13T16.132
LU5T13.239
LU6T17.818
LU14T12.959
LU17T13.243
LU50N11.37
LU52N13.104
LU18T12.709
LU55N13.083
LU3N13.188
P16B14.526
P2311.758
OVR1611.259
OVR199.748
OVR2712.112
OVR2811.91
OVR278E12.941
OVR211.904
OVR512.431
OVR813.11
OVR1112.837
OVR1212.76
OVR1311.864
OVR2212.902
OVR2612.628
OVR1013.305
OVR278S13.219
OVR112.668
LU19T12.48
LU20T12.78
LU24T12.813
LU25T12.827
LU31T13.949
LU34T13.181
LU39T11.844
CO14T13.233
CO21T14.323
CO23T13.263
CO41N12.553
LU40T13.405
LU41T12.128
LU44T13.147
LU46T12.927
LU49T12.65
L5N13.616
LU42T13.015
LU30T12.973
LU43T14.336
CO5T13.357
CO44T12.35
CO49T13.164
CO51T13.208
CO56T12.518
CO61T12.519
LU26T13.78
LU33T14.865
LU36T12.558
CO43T13.899
G1811.685
G469.695
L11T18.172
L13N13.959
L30T14.1
L31T14.24
L32T14.215
L34T13.76
L35T14.664
B1N13.304
B5N10.617
B8T12.586
B10T12.738
B14T13.871
B16T12.712
B17T13.072
B1NR12.65
B20T15.575
B51NR12.967
B6T17.548
B15T23.758
B21T16.813
B29T12.161
B31T14.487
B32T14.711
B24T12.926
B46T13.292
B34T13.376
B36T12.925
B37T16.745
B38T16.103
B39T12.218
X10212.988
X116_0213.166
G28011.991
X4612.453
X5810.486
G18613.145
G29612.921
L38T13.003
L31T.212.531
L26N13.418
N257ANTR13.284
N285BODY12.308
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_15096_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.18 ± 1.03
Basal Forebrain1.71 ± 0.21
Basal Part of Pons1.6 ± 0.56
Cerebellar Cortex1.64 ± 0.7
Cerebellar Nuclei2.08 ± 0.74
Claustrum2.65 ± 0.86
Epithalamus1.5 ± 0.82
Frontal Lobe1.68 ± 0.68
Globus Pallidus2.32 ± 0.33
Hypothalamus1.74 ± 0.65
Insula1.7 ± 0.61
Limbic Lobe1.81 ± 0.62
Mesencephalon1.95 ± 0.67
Myelencephalon1.83 ± 0.75
Occipital Lobe1.76 ± 0.69
Parietal Lobe1.73 ± 0.75
Pontine Tegmentum1.76 ± 0.63
Striatum1.98 ± 0.69
Subthalamus1.91 ± 0.63
Temporal Lobe1.64 ± 0.55
Thalamus1.77 ± 0.62
White Matter2.34 ± 0.38
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
OsmCBCerebellum7.06
9.79
OsmCTXCerebral cortex3.35
2.92
OsmHIPHippocampal region3.3
3.86
OsmHPFHippocampal formation3.06
3.1
OsmHYHypothalamus0.47
0.45
OsmLSXLateral septal complex4.51
5.5
OsmMBMidbrain1.85
2.06
OsmMYMedulla8.48
9.66
OsmOLFOlfactory bulb4.91
4.4
OsmPPons2.33
2.37
OsmPALPallidum1.33
1.44
OsmRHPRetrohippocampal region2.64
1.99
OsmsAMYStriatum-like amygdalar nuclei1.71
1.29
OsmSTRStriatum1.69
1.73
OsmSTRdStriatum dorsal region1.6
1.76
OsmSTRvStriatum ventral region1.1
0.74
OsmTHThalamus2.4
2.42
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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