AutismKB 2.0

Annotation Detail for OVGP1


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Basic Information Top
Gene Symbol:OVGP1 ( CHIT5,EGP,MUC9,OGP )
Gene Full Name: oviductal glycoprotein 1, 120kDa
Band: 1p13.2
Quick LinksEntrez ID:5016; OMIM: 603578; Uniprot ID:OVGP1_HUMAN; ENSEMBL ID: ENSG00000085465; HGNC ID: 8524
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus11 / 56401219
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult220 / 1939121113
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor3 / 26384511
glioma1 / 1068839
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor1 / 9635910
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal232 / 336030769
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor4 / 12519131
uterine tumor11 / 90257121
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone1 / 7165513
bone marrow0 / 488010 
brain5 / 11009894
cervix1 / 4817120
connective tissue6 / 14925540
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye2 / 2110549
heart1 / 8962611
intestine5 / 23447221
kidney4 / 21177718
larynx0 / 241450 
liver4 / 20774319
lung4 / 33697411
lymph0 / 442700 
lymph node1 / 9161010
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve1 / 1576863
ovary188 / 1020511842
pancreas1 / 2148124
parathyroid5 / 20539243
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta7 / 28082524
prostate5 / 18934526
salivary gland0 / 201550 
skin0 / 2105740 
spleen1 / 5395218
stomach0 / 966190 
testis6 / 33044218
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus17 / 23287872
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 205432_at
Cell line Expression level Expression bar
721_B_lymphoblasts9.95
Adipocyte8
AdrenalCortex8.35
Adrenalgland10.7
Amygdala8.55
Appendix12.75
AtrioventricularNode6.7
BDCA4+_DentriticCells7.85
Bonemarrow8.45
BronchialEpithelialCells6.75
CD105+_Endothelial7.35
CD14+_Monocytes7.8
CD19+_BCells(neg._sel.)8.6
CD33+_Myeloid8.25
CD34+8.65
CD4+_Tcells16.25
CD56+_NKCells9.7
CD71+_EarlyErythroid7.5
CD8+_Tcells8.55
CardiacMyocytes9.9
Caudatenucleus9.45
Cerebellum6.55
CerebellumPeduncles11.15
CiliaryGanglion6
CingulateCortex9.6
Colorectaladenocarcinoma7.4
DorsalRootGanglion6.15
FetalThyroid8.05
Fetalbrain8.1
Fetalliver14.1
Fetallung7.25
GlobusPallidus7.9
Heart11.45
Hypothalamus9.35
Kidney8.05
Leukemia_chronicMyelogenousK-5628.45
Leukemia_promyelocytic-HL-607.55
Leukemialymphoblastic(MOLT-4)9.1
Liver16.05
Lung9
Lymphnode9.55
Lymphoma_burkitts(Daudi)10.55
Lymphoma_burkitts(Raji)12
MedullaOblongata7.55
OccipitalLobe7.25
OlfactoryBulb5.55
Ovary5.3
Pancreas5.8
PancreaticIslet8.85
ParietalLobe11.65
Pituitary13.65
Placenta8.2
Pons11.3
PrefrontalCortex8.4
Prostate9.6
Salivarygland5.8
SkeletalMuscle9.9
Skin6.4
SmoothMuscle7.3
Spinalcord11.05
SubthalamicNucleus9.3
SuperiorCervicalGanglion10
TemporalLobe10.2
Testis9.5
TestisGermCell7.7
TestisIntersitial6.35
TestisLeydigCell8.2
TestisSeminiferousTubule9.9
Thalamus7.8
Thymus6.35
Thyroid10.2
Tongue7.75
Tonsil8.5
Trachea6.8
TrigeminalGanglion10.35
Uterus7
UterusCorpus8.6
WholeBlood7.75
Wholebrain7.45
colon8.15
pineal_day8.34
pineal_night8.3
retina9.125
small_intestine7.85
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_8904_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.22 ± 1.13
Basal Forebrain2.52 ± 0.35
Basal Part of Pons2.34 ± 0.63
Cerebellar Cortex2.43 ± 0.85
Cerebellar Nuclei2.76 ± 0.65
Claustrum3.72 ± 0.9
Epithalamus2.28 ± 1.03
Frontal Lobe2.48 ± 0.81
Globus Pallidus2.99 ± 0.71
Hypothalamus2.47 ± 0.73
Insula2.63 ± 0.99
Limbic Lobe2.73 ± 0.81
Mesencephalon2.72 ± 0.79
Myelencephalon2.71 ± 0.75
Occipital Lobe2.78 ± 0.84
Parietal Lobe2.87 ± 0.94
Pontine Tegmentum2.78 ± 0.97
Striatum2.97 ± 0.86
Subthalamus2.62 ± 0.83
Temporal Lobe2.63 ± 0.91
Thalamus2.6 ± 0.65
White Matter2.95 ± 0.51
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Ovgp1CBCerebellum0.92
1.12
Ovgp1CTXCerebral cortex0.43
0.42
Ovgp1HIPHippocampal region1.84
1.57
Ovgp1HPFHippocampal formation1.48
1.2
Ovgp1HYHypothalamus0.5
0.37
Ovgp1LSXLateral septal complex0.12
0.07
Ovgp1MBMidbrain0.97
0.95
Ovgp1MYMedulla3.03
3.77
Ovgp1OLFOlfactory bulb0.51
0.41
Ovgp1PPons1.2
1.49
Ovgp1PALPallidum0.29
0.49
Ovgp1RHPRetrohippocampal region1.02
0.79
Ovgp1sAMYStriatum-like amygdalar nuclei0.09
0.05
Ovgp1STRStriatum0.12
0.2
Ovgp1STRdStriatum dorsal region0.11
0.19
Ovgp1STRvStriatum ventral region0.11
0.14
Ovgp1THThalamus0.49
0.44
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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