Annotation Detail for PNPLA8
Basic Information Top
| Gene Symbol: | PNPLA8 ( IPLA2(GAMMA),IPLA2-2,IPLA2G ) |
|---|---|
| Gene Full Name: | patatin-like phospholipase domain containing 8 |
| Band: | 7q31.1 |
| Quick Links | Entrez ID:50640; OMIM: 612123; Uniprot ID:PLPL8_HUMAN; ENSEMBL ID: ENSG00000135241; HGNC ID: 28900 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.617340
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 50 / 564012 | 88 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 88 / 1939121 | 45 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 7 / 114246 | 61 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 28 / 263845 | 106 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 10 / 136302 | 73 | |
| kidney tumor | 6 / 68959 | 87 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 7 / 96359 | 72 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 5 / 71755 | 69 | |
| non-neoplasia | 11 / 97250 | 113 | |
| normal | 240 / 3360307 | 71 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 13 / 125680 | 103 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 3 / 33197 | 90 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 2 / 29757 | 67 | |
| blood | 10 / 123478 | 80 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 142 / 1100989 | 128 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 8 / 149255 | 53 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 12 / 211054 | 56 | |
| heart | 2 / 89626 | 22 | |
| intestine | 14 / 234472 | 59 | |
| kidney | 14 / 211777 | 66 | |
| larynx | 0 / 24145 | 0 | |
| liver | 13 / 207743 | 62 | |
| lung | 14 / 336974 | 41 | |
| lymph | 3 / 44270 | 67 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 10 / 67052 | 149 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 19 / 280825 | 67 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 3 / 210574 | 14 | |
| spleen | 4 / 53952 | 74 | |
| stomach | 5 / 96619 | 51 | |
| testis | 35 / 330442 | 105 | |
| thymus | 12 / 81131 | 147 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 5 / 52413 | 95 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 12 / 232878 | 51 | |
| vascular | 8 / 51780 | 154 | |
- Probe name: A_24_P85045
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.46 ± 0.52 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.38 ± 0.21 | |
| Basal Part of Pons | 6.33 ± 0.23 | |
| Cerebellar Cortex | 5.96 ± 0.27 | |
| Cerebellar Nuclei | 6.02 ± 0.57 | |
| Claustrum | 5.9 ± 0.69 | |
| Epithalamus | 6.52 ± 0.47 | |
| Frontal Lobe | 6.35 ± 0.38 | |
| Globus Pallidus | 6.29 ± 0.46 | |
| Hypothalamus | 6.55 ± 0.21 | |
| Insula | 6.33 ± 0.25 | |
| Limbic Lobe | 6.21 ± 0.51 | |
| Mesencephalon | 6.29 ± 0.41 | |
| Myelencephalon | 6.26 ± 0.46 | |
| Occipital Lobe | 6.32 ± 0.49 | |
| Parietal Lobe | 6.37 ± 0.37 | |
| Pontine Tegmentum | 6.32 ± 0.44 | |
| Striatum | 6.49 ± 0.31 | |
| Subthalamus | 6.01 ± 0.97 | |
| Temporal Lobe | 6.27 ± 0.5 | |
| Thalamus | 6.27 ± 0.46 | |
| White Matter | 6.05 ± 0.2 | |
Mouse Brain ISH 
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00011119 | 19 | 582 | 600 | NYGHFPGINSHYLGGCQYK | Peptide Atlas |