Annotation Detail for PAX4
Basic Information Top
| Gene Symbol: | PAX4 ( KPD,MGC129960,MODY9 ) |
|---|---|
| Gene Full Name: | paired box 4 |
| Band: | 7q32.1 |
| Quick Links | Entrez ID:5078; OMIM: 167413; Uniprot ID:PAX4_HUMAN; ENSEMBL ID: ENSG00000106331; HGNC ID: 8618 |
| Relate to Another Database: | SFARIGene; denovo-db |
Unigene EST- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 207867_at
| Cell line | Expression level | Expression bar |
|---|---|---|
 | ||
| 721_B_lymphoblasts | 6.4 |  |
| Adipocyte | 5.55 | |
| AdrenalCortex | 6.5 | |
| Adrenalgland | 4.9 | |
| Amygdala | 5.8 | |
| Appendix | 6.75 | |
| AtrioventricularNode | 4.9 | |
| BDCA4+_DentriticCells | 5.9 | |
| Bonemarrow | 5.9 | |
| BronchialEpithelialCells | 5.45 | |
| CD105+_Endothelial | 5.6 | |
| CD14+_Monocytes | 5.95 | |
| CD19+_BCells(neg._sel.) | 5.8 | |
| CD33+_Myeloid | 6.95 | |
| CD34+ | 6.7 | |
| CD4+_Tcells | 5.8 | |
| CD56+_NKCells | 6.3 | |
| CD71+_EarlyErythroid | 5.35 | |
| CD8+_Tcells | 5.1 | |
| CardiacMyocytes | 8.25 | |
| Caudatenucleus | 5.05 | |
| Cerebellum | 4.6 | |
| CerebellumPeduncles | 6.8 | |
| CiliaryGanglion | 4.4 | |
| CingulateCortex | 5.85 | |
| Colorectaladenocarcinoma | 5.65 | |
| DorsalRootGanglion | 5.1 | |
| FetalThyroid | 5.5 | |
| Fetalbrain | 5.4 | |
| Fetalliver | 4.95 | |
| Fetallung | 4.4 | |
| GlobusPallidus | 4.25 | |
| Heart | 8.1 | |
| Hypothalamus | 6 | |
| Kidney | 4.85 | |
| Leukemia_chronicMyelogenousK-562 | 5 | |
| Leukemia_promyelocytic-HL-60 | 4.95 | |
| Leukemialymphoblastic(MOLT-4) | 4.45 | |
| Liver | 7.9 | |
| Lung | 6.1 | |
| Lymphnode | 4.75 | |
| Lymphoma_burkitts(Daudi) | 7.4 | |
| Lymphoma_burkitts(Raji) | 8.2 | |
| MedullaOblongata | 5.1 | |
| OccipitalLobe | 5 | |
| OlfactoryBulb | 4.4 | |
| Ovary | 3.9 | |
| Pancreas | 4.6 | |
| PancreaticIslet | 6.05 | |
| ParietalLobe | 6.2 | |
| Pituitary | 6.55 | |
| Placenta | 5.55 | |
| Pons | 5.8 | |
| PrefrontalCortex | 6.9 | |
| Prostate | 6.45 | |
| Salivarygland | 4.65 | |
| SkeletalMuscle | 7.4 | |
| Skin | 4.75 | |
| SmoothMuscle | 6.3 | |
| Spinalcord | 5.95 | |
| SubthalamicNucleus | 5.55 | |
| SuperiorCervicalGanglion | 10.15 |  |
| TemporalLobe | 5.35 | |
| Testis | 4.8 | |
| TestisGermCell | 4.55 | |
| TestisIntersitial | 4.8 | |
| TestisLeydigCell | 5.7 | |
| TestisSeminiferousTubule | 4.8 | |
| Thalamus | 5.8 | |
| Thymus | 4.3 | |
| Thyroid | 6.95 | |
| Tongue | 5.9 | |
| Tonsil | 5.55 | |
| Trachea | 4.7 | |
| TrigeminalGanglion | 7.45 | |
| Uterus | 4.55 | |
| UterusCorpus | 5.45 | |
| WholeBlood | 6.1 | |
| Wholebrain | 4.6 | |
| colon | 5.65 | |
| pineal_day | 6.86 | |
| pineal_night | 6.8 | |
| retina | 6.9 | |
| small_intestine | 5.4 | |
- Probe name: CUST_13497_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.05 ± 1.11 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 1.49 ± 0.19 | |
| Basal Part of Pons | 1.44 ± 0.61 | |
| Cerebellar Cortex | 1.4 ± 0.63 | |
| Cerebellar Nuclei | 2.01 ± 0.8 | |
| Claustrum | 2.43 ± 0.81 | |
| Epithalamus | 1.36 ± 0.81 | |
| Frontal Lobe | 1.49 ± 0.84 | |
| Globus Pallidus | 2.06 ± 0.76 | |
| Hypothalamus | 1.75 ± 0.74 | |
| Insula | 1.4 ± 0.52 | |
| Limbic Lobe | 1.58 ± 0.66 | |
| Mesencephalon | 1.69 ± 0.8 | |
| Myelencephalon | 1.71 ± 0.69 | |
| Occipital Lobe | 1.75 ± 0.76 | |
| Parietal Lobe | 1.66 ± 0.72 | |
| Pontine Tegmentum | 1.63 ± 0.77 | |
| Striatum | 1.81 ± 0.8 | |
| Subthalamus | 1.63 ± 0.62 | |
| Temporal Lobe | 1.51 ± 0.67 | |
| Thalamus | 1.61 ± 0.67 | |
| White Matter | 2 ± 0.39 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Pax4 | CB | Cerebellum | 9.46 |  |
| 9.41 | | |||
| Pax4 | CTX | Cerebral cortex | 15.13 | |
| 9.99 | | |||
| Pax4 | HIP | Hippocampal region | 8.69 | |
| 7 | | |||
| Pax4 | HPF | Hippocampal formation | 9.12 | |
| 6.74 | | |||
| Pax4 | HY | Hypothalamus | 4.57 | |
| 3.24 | | |||
| Pax4 | LSX | Lateral septal complex | 0.72 | |
| 0.49 | | |||
| Pax4 | MB | Midbrain | 3.92 | |
| 3.46 | | |||
| Pax4 | MY | Medulla | 9.44 | |
| 8.23 | | |||
| Pax4 | OLF | Olfactory bulb | 12.27 | |
| 8.97 | | |||
| Pax4 | P | Pons | 5.35 | |
| 4.77 | | |||
| Pax4 | PAL | Pallidum | 5.21 | |
| 3.72 | | |||
| Pax4 | RHP | Retrohippocampal region | 10.46 | |
| 6.74 | | |||
| Pax4 | sAMY | Striatum-like amygdalar nuclei | 4.47 | |
| 2.75 | | |||
| Pax4 | STR | Striatum | 3.52 | |
| 2.29 | | |||
| Pax4 | STRd | Striatum dorsal region | 4.02 | |
| 2.59 | | |||
| Pax4 | STRv | Striatum ventral region | 2.46 | |
| 1.74 | | |||
| Pax4 | TH | Thalamus | 8.91 | |
| 8.04 | |