AutismKB 2.0

Annotation Detail for TAS2R1


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Basic Information Top
Gene Symbol:TAS2R1 ( MGC126778,MGC126780,T2R1,TRB7 )
Gene Full Name: taste receptor, type 2, member 1
Band: 5p15.31
Quick LinksEntrez ID:50834; OMIM: 604796; Uniprot ID:TA2R1_HUMAN; ENSEMBL ID: ENSG00000169777; HGNC ID: 14909
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult2 / 19391211
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal0 / 33603070 
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain0 / 11009890 
cervix0 / 481710 
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine0 / 2344720 
kidney0 / 2117770 
larynx0 / 241450 
liver0 / 2077430 
lung0 / 3369740 
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 221324_at
Cell line Expression level Expression bar
721_B_lymphoblasts4.85
Adipocyte3.75
AdrenalCortex4.05
Adrenalgland3.15
Amygdala4.1
Appendix3.75
AtrioventricularNode3
BDCA4+_DentriticCells4.3
Bonemarrow3.7
BronchialEpithelialCells3.8
CD105+_Endothelial3.85
CD14+_Monocytes4.1
CD19+_BCells(neg._sel.)4.1
CD33+_Myeloid5
CD34+4.9
CD4+_Tcells4.25
CD56+_NKCells4.65
CD71+_EarlyErythroid3.55
CD8+_Tcells3.75
CardiacMyocytes4.7
Caudatenucleus3.4
Cerebellum3.1
CerebellumPeduncles4.3
CiliaryGanglion2.7
CingulateCortex4.1
Colorectaladenocarcinoma3.85
DorsalRootGanglion2.95
FetalThyroid3.7
Fetalbrain3.85
Fetalliver3.25
Fetallung3.1
GlobusPallidus4.9
Heart4.75
Hypothalamus4.2
Kidney3
Leukemia_chronicMyelogenousK-5623.45
Leukemia_promyelocytic-HL-603.6
Leukemialymphoblastic(MOLT-4)3.3
Liver4.95
Lung4.15
Lymphnode3.3
Lymphoma_burkitts(Daudi)4.8
Lymphoma_burkitts(Raji)5.2
MedullaOblongata3.5
OccipitalLobe3.45
OlfactoryBulb2.95
Ovary2.45
Pancreas3.05
PancreaticIslet4.05
ParietalLobe3.95
Pituitary5.25
Placenta3.9
Pons3.6
PrefrontalCortex4.85
Prostate4.45
Salivarygland3.05
SkeletalMuscle5.25
Skin2.95
SmoothMuscle4.35
Spinalcord4.05
SubthalamicNucleus3.4
SuperiorCervicalGanglion4.3
TemporalLobe3.45
Testis3.3
TestisGermCell3.25
TestisIntersitial3.2
TestisLeydigCell3.75
TestisSeminiferousTubule3.25
Thalamus3.85
Thymus3.05
Thyroid4.8
Tongue3.7
Tonsil3.7
Trachea3.2
TrigeminalGanglion3.85
Uterus3.15
UterusCorpus3.35
WholeBlood4.25
Wholebrain3.3
colon3.85
pineal_day4.76
pineal_night4.64
retina4.675
small_intestine3.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_2088_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.21 ± 1.15
Basal Forebrain2.4 ± 0.48
Basal Part of Pons2.87 ± 0.89
Cerebellar Cortex2.6 ± 0.62
Cerebellar Nuclei3.28 ± 0.93
Claustrum3.44 ± 0.83
Epithalamus2.92 ± 1.39
Frontal Lobe2.83 ± 0.81
Globus Pallidus3.28 ± 0.66
Hypothalamus2.65 ± 0.68
Insula2.39 ± 0.62
Limbic Lobe2.93 ± 0.84
Mesencephalon3.12 ± 0.84
Myelencephalon2.97 ± 0.84
Occipital Lobe2.92 ± 0.98
Parietal Lobe2.89 ± 0.83
Pontine Tegmentum2.87 ± 0.85
Striatum4.02 ± 0.71
Subthalamus3.18 ± 0.2
Temporal Lobe2.79 ± 0.89
Thalamus2.94 ± 0.72
White Matter2.7 ± 1.16
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Tas2r119CBCerebellum1.69
2.29
Tas2r119CTXCerebral cortex0.36
0.54
Tas2r119HIPHippocampal region0.6
0.56
Tas2r119HPFHippocampal formation0.94
1.04
Tas2r119HYHypothalamus0.22
0.29
Tas2r119LSXLateral septal complex0
0
Tas2r119MBMidbrain0.4
0.74
Tas2r119MYMedulla4.76
5.68
Tas2r119OLFOlfactory bulb1.14
1.07
Tas2r119PPons1.1
1.24
Tas2r119PALPallidum1.26
2.06
Tas2r119RHPRetrohippocampal region1.67
1.88
Tas2r119sAMYStriatum-like amygdalar nuclei0.18
0.19
Tas2r119STRStriatum0.38
0.49
Tas2r119STRdStriatum dorsal region0.14
0.14
Tas2r119STRvStriatum ventral region1.16
1.55
Tas2r119THThalamus0.22
0.2
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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