Annotation Detail for FAM158A
Basic Information Top
| Gene Symbol: | FAM158A ( C14orf122 ) |
|---|---|
| Gene Full Name: | family with sequence similarity 158, member A |
| Band: | 14q11.2 |
| Quick Links | Entrez ID:51016; OMIM: NA; Uniprot ID:F158A_HUMAN; ENSEMBL ID: ENSG00000100908; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.271614
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
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| embryoid body | 1 / 70761 | 14 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 10 / 564012 | 17 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 34 / 1939121 | 17 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
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| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 5 / 106883 | 46 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 41 / 3360307 | 12 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 4 / 125191 | 31 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
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| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 15 / 1100989 | 13 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 2 / 211054 | 9 | |
| heart | 4 / 89626 | 44 | |
| intestine | 7 / 234472 | 29 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 0 / 24145 | 0 | |
| liver | 1 / 207743 | 4 | |
| lung | 4 / 336974 | 11 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 5 / 91610 | 54 | |
| mammary gland | 8 / 153271 | 52 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 3 / 214812 | 13 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 4 / 210574 | 18 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 0 / 330442 | 0 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 219203_at
| Cell line | Expression level | Expression bar |
|---|---|---|
![]() | ||
| 721_B_lymphoblasts | 33.3 | |
| Adipocyte | 6.8 | |
| AdrenalCortex | 7.4 | |
| Adrenalgland | 6.2 | |
| Amygdala | 8.45 | |
| Appendix | 6.1 | |
| AtrioventricularNode | 4.5 | |
| BDCA4+_DentriticCells | 9.25 | |
| Bonemarrow | 8.5 | |
| BronchialEpithelialCells | 17.8 | |
| CD105+_Endothelial | 12.25 | |
| CD14+_Monocytes | 6.5 | |
| CD19+_BCells(neg._sel.) | 7.25 | |
| CD33+_Myeloid | 7.95 | |
| CD34+ | 7.55 | |
| CD4+_Tcells | 7.15 | |
| CD56+_NKCells | 8.2 | |
| CD71+_EarlyErythroid | 38.55 | |
| CD8+_Tcells | 6.55 | |
| CardiacMyocytes | 8.95 | |
| Caudatenucleus | 6.35 | |
| Cerebellum | 9.05 | |
| CerebellumPeduncles | 11.9 | |
| CiliaryGanglion | 3 | |
| CingulateCortex | 7.45 | |
| Colorectaladenocarcinoma | 6.85 | |
| DorsalRootGanglion | 4.5 | |
| FetalThyroid | 7.05 | |
| Fetalbrain | 7.25 | |
| Fetalliver | 5.25 | |
| Fetallung | 4.9 | |
| GlobusPallidus | 5.05 | |
| Heart | 34.55 | |
| Hypothalamus | 7.85 | |
| Kidney | 6 | |
| Leukemia_chronicMyelogenousK-562 | 6.3 | |
| Leukemia_promyelocytic-HL-60 | 14.65 | |
| Leukemialymphoblastic(MOLT-4) | 11.75 | |
| Liver | 31.05 | |
| Lung | 13.8 | |
| Lymphnode | 6.25 | |
| Lymphoma_burkitts(Daudi) | 30.65 | |
| Lymphoma_burkitts(Raji) | 16.6 | |
| MedullaOblongata | 6.3 | |
| OccipitalLobe | 6.45 | |
| OlfactoryBulb | 5.25 | |
| Ovary | 4.7 | |
| Pancreas | 7.6 | |
| PancreaticIslet | 7.7 | |
| ParietalLobe | 7.7 | |
| Pituitary | 27.9 | |
| Placenta | 6.8 | |
| Pons | 6 | |
| PrefrontalCortex | 8.6 | |
| Prostate | 17 | |
| Salivarygland | 4.9 | |
| SkeletalMuscle | 10.4 | |
| Skin | 5.35 | |
| SmoothMuscle | 7.9 | |
| Spinalcord | 7.5 | |
| SubthalamicNucleus | 5.4 | |
| SuperiorCervicalGanglion | 6.35 | |
| TemporalLobe | 6.6 | |
| Testis | 7.65 | |
| TestisGermCell | 6 | |
| TestisIntersitial | 6.05 | |
| TestisLeydigCell | 6.9 | |
| TestisSeminiferousTubule | 5.9 | |
| Thalamus | 7.25 | |
| Thymus | 20.45 | |
| Thyroid | 13.7 | |
| Tongue | 7.4 | |
| Tonsil | 6.95 | |
| Trachea | 5.75 | |
| TrigeminalGanglion | 6.9 | |
| Uterus | 5.75 | |
| UterusCorpus | 6.3 | |
| WholeBlood | 6.5 | |
| Wholebrain | 29.95 | |
| colon | 8.8 | |
| pineal_day | 16 | |
| pineal_night | 14.86 | |
| retina | 12.7 | |
| small_intestine | 19.5 |
- Probe name: CUST_5710_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.45 ± 0.71 | |
| Basal Forebrain | 6.7 ± 0.33 | |
| Basal Part of Pons | 7.7 ± 0.26 | |
| Cerebellar Cortex | 7.41 ± 0.3 | |
| Cerebellar Nuclei | 7.14 ± 0.39 | |
| Claustrum | 6.19 ± 0.78 | |
| Epithalamus | 6.94 ± 0.37 | |
| Frontal Lobe | 7.06 ± 0.48 | |
| Globus Pallidus | 5.76 ± 0.3 | |
| Hypothalamus | 7.36 ± 0.32 | |
| Insula | 7.1 ± 0.33 | |
| Limbic Lobe | 6.72 ± 0.73 | |
| Mesencephalon | 6.61 ± 0.6 | |
| Myelencephalon | 6.76 ± 0.73 | |
| Occipital Lobe | 6.28 ± 0.72 | |
| Parietal Lobe | 6.86 ± 0.52 | |
| Pontine Tegmentum | 6.8 ± 0.45 | |
| Striatum | 6.26 ± 0.58 | |
| Subthalamus | 7.35 ± 0.4 | |
| Temporal Lobe | 7.1 ± 0.48 | |
| Thalamus | 6.64 ± 0.47 | |
| White Matter | 5.56 ± 0.24 |
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 1500005A01Rik | CB | Cerebellum | 2.41 | |
| 3.51 | ||||
| 1500005A01Rik | CTX | Cerebral cortex | 2.7 | |
| 2.32 | ||||
| 1500005A01Rik | HIP | Hippocampal region | 7.73 | |
| 7.27 | ||||
| 1500005A01Rik | HPF | Hippocampal formation | 7.52 | |
| 6.75 | ||||
| 1500005A01Rik | HY | Hypothalamus | 11.49 | |
| 10.76 | ||||
| 1500005A01Rik | LSX | Lateral septal complex | 0.15 | |
| 0.12 | ||||
| 1500005A01Rik | MB | Midbrain | 6.83 | |
| 8.72 | ||||
| 1500005A01Rik | MY | Medulla | 10.04 | |
| 17.14 | ||||
| 1500005A01Rik | OLF | Olfactory bulb | 10.2 | |
| 9.59 | ||||
| 1500005A01Rik | P | Pons | 15.94 | |
| 26.98 | ||||
| 1500005A01Rik | PAL | Pallidum | 7.11 | |
| 8.45 | ||||
| 1500005A01Rik | RHP | Retrohippocampal region | 7.4 | |
| 6.18 | ||||
| 1500005A01Rik | sAMY | Striatum-like amygdalar nuclei | 2.34 | |
| 1.98 | ||||
| 1500005A01Rik | STR | Striatum | 1.16 | |
| 1.23 | ||||
| 1500005A01Rik | STRd | Striatum dorsal region | 0.55 | |
| 0.72 | ||||
| 1500005A01Rik | STRv | Striatum ventral region | 3.24 | |
| 2.94 | ||||
| 1500005A01Rik | TH | Thalamus | 2.85 | |
| 2.62 |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| F158A_HUMAN_158 | 10 | 158 | 167 | QMVGALLEDR | PRIDE |



