AutismKB 2.0

Annotation Detail for RRP15


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Basic Information Top
Gene Symbol:RRP15 ( KIAA0507,MGC22291 )
Gene Full Name: ribosomal RNA processing 15 homolog (S. cerevisiae)
Band: 1q41
Quick LinksEntrez ID:51018; OMIM: 611193; Uniprot ID:RRP15_HUMAN; ENSEMBL ID: ENSG00000067533; HGNC ID: 24255
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst1 / 6231916
fetus19 / 56401233
neonate0 / 310970 
infant1 / 2362042
juvenile0 / 555560 
adult38 / 193912119
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma2 / 17475114
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma4 / 8282348
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor5 / 11936941
germ cell tumor6 / 26384522
glioma1 / 1068839
head and neck tumor1 / 1363027
kidney tumor1 / 6895914
leukemia1 / 9584210
liver tumor4 / 9635941
lung tumor3 / 10312729
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal67 / 336030719
ovarian tumor1 / 7668213
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS6 / 12568047
prostate cancer0 / 1026800 
retinoblastoma1 / 4635621
skin tumor3 / 12494924
soft tissue/muscle tissue tumor18 / 125191143
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder2 / 2975767
blood0 / 1234780 
bone3 / 7165541
bone marrow1 / 4880120
brain14 / 110098912
cervix0 / 481710 
connective tissue14 / 14925593
ear1 / 1621261
embryonic tissue8 / 21572237
esophagus0 / 202090 
eye3 / 21105414
heart1 / 8962611
intestine7 / 23447229
kidney4 / 21177718
larynx0 / 241450 
liver7 / 20774333
lung8 / 33697423
lymph0 / 442700 
lymph node6 / 9161065
mammary gland2 / 15327113
mouth0 / 670520 
muscle5 / 10771546
nerve0 / 157680 
ovary1 / 1020519
pancreas4 / 21481218
parathyroid1 / 2053948
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta1 / 2808253
prostate1 / 1893455
salivary gland2 / 2015599
skin7 / 21057433
spleen0 / 539520 
stomach1 / 9661910
testis7 / 33044221
thymus0 / 811310 
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus4 / 23287817
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 214764_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.7
Adipocyte6.8
AdrenalCortex8.3
Adrenalgland6.2
Amygdala7.4
Appendix8.5
AtrioventricularNode8
BDCA4+_DentriticCells7.8
Bonemarrow7.5
BronchialEpithelialCells6.65
CD105+_Endothelial7.25
CD14+_Monocytes7.55
CD19+_BCells(neg._sel.)7.8
CD33+_Myeloid8.85
CD34+9.15
CD4+_Tcells7.9
CD56+_NKCells8.05
CD71+_EarlyErythroid7.05
CD8+_Tcells6.9
CardiacMyocytes12.4
Caudatenucleus6.2
Cerebellum5.85
CerebellumPeduncles10.15
CiliaryGanglion6.15
CingulateCortex7.5
Colorectaladenocarcinoma7.3
DorsalRootGanglion6.3
FetalThyroid7.95
Fetalbrain6.9
Fetalliver6.35
Fetallung5.15
GlobusPallidus6.6
Heart11.45
Hypothalamus7.75
Kidney6.15
Leukemia_chronicMyelogenousK-5626.35
Leukemia_promyelocytic-HL-606.2
Leukemialymphoblastic(MOLT-4)5.75
Liver10.7
Lung7.4
Lymphnode6.15
Lymphoma_burkitts(Daudi)9.5
Lymphoma_burkitts(Raji)10.35
MedullaOblongata6.15
OccipitalLobe6.25
OlfactoryBulb5.4
Ovary5.2
Pancreas5.9
PancreaticIslet7.8
ParietalLobe8.4
Pituitary8.5
Placenta7.05
Pons6.95
PrefrontalCortex8.75
Prostate8.1
Salivarygland6
SkeletalMuscle10.05
Skin7.35
SmoothMuscle7.85
Spinalcord7.25
SubthalamicNucleus7.25
SuperiorCervicalGanglion12.05
TemporalLobe6.75
Testis6.05
TestisGermCell5.6
TestisIntersitial5.95
TestisLeydigCell7.1
TestisSeminiferousTubule5.9
Thalamus7.25
Thymus5.15
Thyroid9
Tongue7.4
Tonsil7.25
Trachea5.75
TrigeminalGanglion8.5
Uterus5.9
UterusCorpus6.95
WholeBlood7.6
Wholebrain5.7
colon7.2
pineal_day8.82
pineal_night8.76
retina8.375
small_intestine6.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P221822
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.88 ± 0.62
Basal Forebrain5.17 ± 0.31
Basal Part of Pons5.05 ± 0.41
Cerebellar Cortex5.5 ± 0.15
Cerebellar Nuclei5.22 ± 0.42
Claustrum5.01 ± 0.8
Epithalamus5.07 ± 0.56
Frontal Lobe5.3 ± 0.38
Globus Pallidus5.04 ± 0.38
Hypothalamus5.47 ± 0.39
Insula5.29 ± 0.42
Limbic Lobe4.85 ± 0.54
Mesencephalon5.25 ± 0.44
Myelencephalon5.04 ± 0.53
Occipital Lobe4.9 ± 0.52
Parietal Lobe5.24 ± 0.45
Pontine Tegmentum5.28 ± 0.49
Striatum4.36 ± 0.4
Subthalamus5.83 ± 0.35
Temporal Lobe5.21 ± 0.39
Thalamus5.12 ± 0.52
White Matter5.6 ± 0.25
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
2810430M08RikCBCerebellum27.63
33.87
2810430M08RikCTXCerebral cortex35.54
25.53
2810430M08RikHIPHippocampal region29.25
35.5
2810430M08RikHPFHippocampal formation31.52
31.73
2810430M08RikHYHypothalamus21.46
15.72
2810430M08RikLSXLateral septal complex27.95
19.07
2810430M08RikMBMidbrain23.08
20.07
2810430M08RikMYMedulla26.87
27.86
2810430M08RikOLFOlfactory bulb35.53
28.42
2810430M08RikPPons20.94
21.17
2810430M08RikPALPallidum19.33
15.34
2810430M08RikRHPRetrohippocampal region35.07
26.83
2810430M08RiksAMYStriatum-like amygdalar nuclei14.8
10.04
2810430M08RikSTRStriatum17.46
11.92
2810430M08RikSTRdStriatum dorsal region12.25
8.27
2810430M08RikSTRvStriatum ventral region31.16
20.66
2810430M08RikTHThalamus22.76
18.78
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00496740 23 54 76 DHFYSDDDAIEADSEGDAEPCDK Peptide Atlas
RRP15_HUMAN_2 8 2 9 AAAAPDSR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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