Annotation Detail for PAM16
Basic Information Top
| Gene Symbol: | PAM16 ( Magmas,TIMM16,Tim16 ) |
|---|---|
| Gene Full Name: | presequence translocase-associated motor 16 homolog (S. cerevisiae) |
| Band: | 16p13.3 |
| Quick Links | Entrez ID:51025; OMIM: NA; Uniprot ID:TIM16_HUMAN; ENSEMBL ID: ENSG00000217930; HGNC ID: 29679 |
| Relate to Another Database: | SFARIGene; denovo-db |
Unigene EST- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 218969_at
| Cell line | Expression level | Expression bar |
|---|---|---|
 | ||
| 721_B_lymphoblasts | 67.65 |  |
| Adipocyte | 54 | |
| AdrenalCortex | 68.2 | |
| Adrenalgland | 45.25 |  |
| Amygdala | 59.3 | |
| Appendix | 55.9 | |
| AtrioventricularNode | 38.35 | |
| BDCA4+_DentriticCells | 58.95 | |
| Bonemarrow | 52.7 | |
| BronchialEpithelialCells | 69.4 | |
| CD105+_Endothelial | 71.65 | |
| CD14+_Monocytes | 58 | |
| CD19+_BCells(neg._sel.) | 56.4 | |
| CD33+_Myeloid | 72.4 | |
| CD34+ | 70.75 | |
| CD4+_Tcells | 56.4 | |
| CD56+_NKCells | 63.15 | |
| CD71+_EarlyErythroid | 44.5 | |
| CD8+_Tcells | 58.15 | |
| CardiacMyocytes | 61.25 | |
| Caudatenucleus | 54.35 | |
| Cerebellum | 43.4 | |
| CerebellumPeduncles | 63.1 | |
| CiliaryGanglion | 39.5 | |
| CingulateCortex | 56.6 | |
| Colorectaladenocarcinoma | 44.7 | |
| DorsalRootGanglion | 42.3 | |
| FetalThyroid | 60.65 | |
| Fetalbrain | 53.5 | |
| Fetalliver | 40.55 | |
| Fetallung | 42.6 | |
| GlobusPallidus | 48.75 | |
| Heart | 213.85 |  |
| Hypothalamus | 57.05 | |
| Kidney | 44 | |
| Leukemia_chronicMyelogenousK-562 | 81.8 | |
| Leukemia_promyelocytic-HL-60 | 93.65 | |
| Leukemialymphoblastic(MOLT-4) | 47.3 | |
| Liver | 122.85 | |
| Lung | 67.25 | |
| Lymphnode | 45.65 | |
| Lymphoma_burkitts(Daudi) | 110 | |
| Lymphoma_burkitts(Raji) | 201.35 | |
| MedullaOblongata | 49.1 | |
| OccipitalLobe | 47.85 | |
| OlfactoryBulb | 45.7 | |
| Ovary | 30.6 | |
| Pancreas | 38.45 | |
| PancreaticIslet | 58.4 | |
| ParietalLobe | 56.3 | |
| Pituitary | 63.5 | |
| Placenta | 52.15 | |
| Pons | 58.6 | |
| PrefrontalCortex | 73.55 | |
| Prostate | 62.8 | |
| Salivarygland | 42.8 | |
| SkeletalMuscle | 97.2 | |
| Skin | 42.6 | |
| SmoothMuscle | 51.35 | |
| Spinalcord | 57.8 | |
| SubthalamicNucleus | 58.2 | |
| SuperiorCervicalGanglion | 60.05 | |
| TemporalLobe | 65.85 | |
| Testis | 47.65 | |
| TestisGermCell | 48.25 | |
| TestisIntersitial | 53.05 | |
| TestisLeydigCell | 54.8 | |
| TestisSeminiferousTubule | 66.4 | |
| Thalamus | 63.75 | |
| Thymus | 36.65 | |
| Thyroid | 62 | |
| Tongue | 58 | |
| Tonsil | 52.05 | |
| Trachea | 41.3 | |
| TrigeminalGanglion | 52.4 | |
| Uterus | 38.5 | |
| UterusCorpus | 50.35 | |
| WholeBlood | 43.7 | |
| Wholebrain | 62.35 | |
| colon | 24.9 | |
| pineal_day | 102.62 | |
| pineal_night | 88.62 | |
| retina | 55.225 | |
| small_intestine | 29.45 | |
- Probe name: CUST_1834_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.99 ± 0.26 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.94 ± 0.13 | |
| Basal Part of Pons | 7.24 ± 0.22 | |
| Cerebellar Cortex | 6.87 ± 0.18 | |
| Cerebellar Nuclei | 7.03 ± 0.21 | |
| Claustrum | 6.72 ± 0.35 | |
| Epithalamus | 6.65 ± 0.23 | |
| Frontal Lobe | 7.11 ± 0.3 | |
| Globus Pallidus | 6.83 ± 0.25 | |
| Hypothalamus | 7.17 ± 0.33 | |
| Insula | 7.07 ± 0.36 | |
| Limbic Lobe | 7.07 ± 0.31 | |
| Mesencephalon | 6.98 ± 0.29 | |
| Myelencephalon | 6.97 ± 0.33 | |
| Occipital Lobe | 6.86 ± 0.2 | |
| Parietal Lobe | 7.04 ± 0.28 | |
| Pontine Tegmentum | 7.04 ± 0.31 | |
| Striatum | 7.26 ± 0.29 | |
| Subthalamus | 7.19 ± 0.08 | |
| Temporal Lobe | 7.14 ± 0.26 | |
| Thalamus | 6.88 ± 0.29 | |
| White Matter | 6.5 ± 0.24 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Magmas | CB | Cerebellum | 19.17 | |
| 29.69 | | |||
| Magmas | CTX | Cerebral cortex | 37.59 | |
| 31.81 | | |||
| Magmas | HIP | Hippocampal region | 29.35 | |
| 28.79 | | |||
| Magmas | HPF | Hippocampal formation | 31.06 | |
| 32.22 | | |||
| Magmas | HY | Hypothalamus | 22.37 | |
| 16.92 | | |||
| Magmas | LSX | Lateral septal complex | 10.06 | |
| 6.99 | | |||
| Magmas | MB | Midbrain | 15.28 | |
| 13.37 | | |||
| Magmas | MY | Medulla | 21.47 | |
| 23.74 | | |||
| Magmas | OLF | Olfactory bulb | 50 | |
| 43.3 | | |||
| Magmas | P | Pons | 25.8 | |
| 26.09 | | |||
| Magmas | PAL | Pallidum | 13.11 | |
| 11.31 | | |||
| Magmas | RHP | Retrohippocampal region | 33.77 | |
| 35.13 | | |||
| Magmas | sAMY | Striatum-like amygdalar nuclei | 24.75 | |
| 16.38 | | |||
| Magmas | STR | Striatum | 11.19 | |
| 7.74 | | |||
| Magmas | STRd | Striatum dorsal region | 6.06 | |
| 4.21 | | |||
| Magmas | STRv | Striatum ventral region | 21.58 | |
| 14.09 | | |||
| Magmas | TH | Thalamus | 31.06 | |
| 25.11 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00043332 | 15 | 4 | 18 | YLAQIIVMGVQVVGR | Peptide Atlas |