AutismKB 2.0

Annotation Detail for TTC15


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Basic Information Top
Gene Symbol:TTC15 ( FLJ36862,FLJ44560 )
Gene Full Name: tetratricopeptide repeat domain 15
Band: 2p25.3
Quick LinksEntrez ID:51112; OMIM: NA; Uniprot ID:TTC15_HUMAN; ENSEMBL ID: ENSG00000171853; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst4 / 6231964
fetus20 / 56401235
neonate1 / 3109732
infant0 / 236200 
juvenile3 / 5555653
adult108 / 193912155
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma3 / 17475171
breast (mammary gland) tumor4 / 9417842
cervical tumor3 / 3436687
chondrosarcoma5 / 8282360
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor7 / 11936958
germ cell tumor8 / 26384530
glioma10 / 10688393
head and neck tumor9 / 13630266
kidney tumor3 / 6895943
leukemia46 / 95842479
liver tumor0 / 963590 
lung tumor13 / 103127126
lymphoma1 / 7175513
non-neoplasia0 / 972500 
normal150 / 336030744
ovarian tumor1 / 7668213
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS6 / 12568047
prostate cancer2 / 10268019
retinoblastoma2 / 4635643
skin tumor9 / 12494972
soft tissue/muscle tissue tumor10 / 12519179
uterine tumor4 / 9025744
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland2 / 3319760
ascites2 / 4001549
bladder1 / 2975733
blood8 / 12347864
bone3 / 7165541
bone marrow29 / 48801594
brain49 / 110098944
cervix10 / 48171207
connective tissue10 / 14925566
ear0 / 162120 
embryonic tissue11 / 21572250
esophagus0 / 202090 
eye11 / 21105452
heart4 / 8962644
intestine7 / 23447229
kidney3 / 21177714
larynx5 / 24145207
liver2 / 2077439
lung25 / 33697474
lymph0 / 442700 
lymph node46 / 91610502
mammary gland4 / 15327126
mouth4 / 6705259
muscle4 / 10771537
nerve0 / 157680 
ovary3 / 10205129
pancreas6 / 21481227
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta9 / 28082532
prostate8 / 18934542
salivary gland0 / 201550 
skin16 / 21057475
spleen1 / 5395218
stomach8 / 9661982
testis35 / 330442105
thymus2 / 8113124
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus8 / 23287834
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 203122_at
Cell line Expression level Expression bar
721_B_lymphoblasts29.75
Adipocyte24.3
AdrenalCortex25.95
Adrenalgland20.5
Amygdala25.95
Appendix10.55
AtrioventricularNode11.6
BDCA4+_DentriticCells96.4
Bonemarrow21.45
BronchialEpithelialCells24.5
CD105+_Endothelial27.2
CD14+_Monocytes48
CD19+_BCells(neg._sel.)33.9
CD33+_Myeloid36.8
CD34+51.4
CD4+_Tcells30.2
CD56+_NKCells40
CD71+_EarlyErythroid13.6
CD8+_Tcells32.45
CardiacMyocytes28.1
Caudatenucleus20.9
Cerebellum19.7
CerebellumPeduncles16.9
CiliaryGanglion16.95
CingulateCortex24.9
Colorectaladenocarcinoma27.5
DorsalRootGanglion17.1
FetalThyroid47.85
Fetalbrain24.65
Fetalliver11.65
Fetallung20.75
GlobusPallidus15.65
Heart62.4
Hypothalamus34.25
Kidney19.55
Leukemia_chronicMyelogenousK-56222.1
Leukemia_promyelocytic-HL-6017.7
Leukemialymphoblastic(MOLT-4)19.1
Liver30.1
Lung32.15
Lymphnode25.5
Lymphoma_burkitts(Daudi)31.1
Lymphoma_burkitts(Raji)23.75
MedullaOblongata21.2
OccipitalLobe19.55
OlfactoryBulb23.1
Ovary14.75
Pancreas27
PancreaticIslet26.15
ParietalLobe22.45
Pituitary32.65
Placenta23.55
Pons19.15
PrefrontalCortex31.05
Prostate47.5
Salivarygland19.45
SkeletalMuscle17.45
Skin17.2
SmoothMuscle27.9
Spinalcord26.15
SubthalamicNucleus22.15
SuperiorCervicalGanglion25.25
TemporalLobe22.3
Testis176.45
TestisGermCell52.55
TestisIntersitial163.8
TestisLeydigCell69.15
TestisSeminiferousTubule96.95
Thalamus24.8
Thymus19.75
Thyroid72.4
Tongue23.75
Tonsil23.85
Trachea19.3
TrigeminalGanglion20.8
Uterus22.15
UterusCorpus19.85
WholeBlood40.95
Wholebrain29.8
colon21.9
pineal_day81.56
pineal_night84.2
retina28.9
small_intestine22.45
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_10791_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.75 ± 0.57
Basal Forebrain4.66 ± 0.46
Basal Part of Pons5.3 ± 0.28
Cerebellar Cortex5.22 ± 0.37
Cerebellar Nuclei4.68 ± 0.74
Claustrum4.23 ± 0.8
Epithalamus5.11 ± 0.64
Frontal Lobe5.05 ± 0.47
Globus Pallidus4.95 ± 0.39
Hypothalamus4.88 ± 0.52
Insula5.14 ± 0.38
Limbic Lobe4.79 ± 0.51
Mesencephalon4.86 ± 0.5
Myelencephalon4.86 ± 0.51
Occipital Lobe4.72 ± 0.46
Parietal Lobe4.83 ± 0.47
Pontine Tegmentum4.82 ± 0.55
Striatum4.63 ± 0.52
Subthalamus5.05 ± 0.26
Temporal Lobe5.02 ± 0.45
Thalamus4.91 ± 0.5
White Matter5.14 ± 0.26
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Ttc15CBCerebellum18.82
21.25
Ttc15CTXCerebral cortex65.09
50.62
Ttc15HIPHippocampal region46.2
62.39
Ttc15HPFHippocampal formation54.36
58.92
Ttc15HYHypothalamus35.79
28.54
Ttc15LSXLateral septal complex14.43
11.03
Ttc15MBMidbrain38.47
36.36
Ttc15MYMedulla27.8
36.91
Ttc15OLFOlfactory bulb33.32
30.28
Ttc15PPons32.27
37.42
Ttc15PALPallidum19.63
18.25
Ttc15RHPRetrohippocampal region70.96
56.9
Ttc15sAMYStriatum-like amygdalar nuclei33.35
24.38
Ttc15STRStriatum29.87
22.08
Ttc15STRdStriatum dorsal region29.97
21.69
Ttc15STRvStriatum ventral region33.67
25.58
Ttc15THThalamus35.67
28.95
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00010031 29 138 166 EVPGSEAARPEQEPPVAEPVPVCTIFSQR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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