Annotation Detail for IER3IP1
Basic Information Top
| Gene Symbol: | IER3IP1 ( PRO2309 ) |
|---|---|
| Gene Full Name: | immediate early response 3 interacting protein 1 |
| Band: | 18q21.1 |
| Quick Links | Entrez ID:51124; OMIM: 609382; Uniprot ID:IR3IP_HUMAN; ENSEMBL ID: ENSG00000134049; HGNC ID: 18550 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.130917
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 3 / 62319 | 48 | |
| fetus | 11 / 564012 | 19 | |
| neonate | 1 / 31097 | 32 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 58 / 1939121 | 29 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 |  |
| bladder carcinoma | 5 / 17475 | 286 |  |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 9 / 68959 | 130 | |
| leukemia | 12 / 95842 | 125 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 1 / 103127 | 9 |  |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 149 / 3360307 | 44 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 8 / 124949 | 64 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 7 / 90257 | 77 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 3 / 33197 | 90 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 6 / 29757 | 201 | |
| blood | 2 / 123478 | 16 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 13 / 48801 | 266 | |
| brain | 50 / 1100989 | 45 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 12 / 211054 | 56 | |
| heart | 2 / 89626 | 22 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 22 / 211777 | 103 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 13 / 336974 | 38 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 16 / 214812 | 74 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 3 / 41328 | 72 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 17 / 280825 | 60 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 8 / 20155 | 396 | |
| skin | 12 / 210574 | 56 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 3 / 96619 | 31 | |
| testis | 15 / 330442 | 45 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 12 / 232878 | 51 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_32_P429872
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.23 ± 0.54 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.99 ± 0.23 | |
| Basal Part of Pons | 5.85 ± 0.39 | |
| Cerebellar Cortex | 5.8 ± 0.22 | |
| Cerebellar Nuclei | 5.99 ± 0.35 | |
| Claustrum | 5.38 ± 0.29 | |
| Epithalamus | 5.48 ± 0.46 | |
| Frontal Lobe | 5.58 ± 0.39 | |
| Globus Pallidus | 5.59 ± 0.29 | |
| Hypothalamus | 5.75 ± 0.49 | |
| Insula | 5.45 ± 0.38 | |
| Limbic Lobe | 5.22 ± 0.53 | |
| Mesencephalon | 5.46 ± 0.43 | |
| Myelencephalon | 5.41 ± 0.47 | |
| Occipital Lobe | 5.29 ± 0.47 | |
| Parietal Lobe | 5.51 ± 0.45 | |
| Pontine Tegmentum | 5.43 ± 0.41 | |
| Striatum | 4.96 ± 0.37 | |
| Subthalamus | 5.84 ± 0.34 | |
| Temporal Lobe | 5.42 ± 0.38 | |
| Thalamus | 5.5 ± 0.39 | |
| White Matter | 5.75 ± 0.67 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ier3ip1 | CB | Cerebellum | 7.34 | |
| 14.04 | | |||
| Ier3ip1 | CTX | Cerebral cortex | 4.16 | |
| 3.26 | | |||
| Ier3ip1 | HIP | Hippocampal region | 14.25 | |
| 16.39 | | |||
| Ier3ip1 | HPF | Hippocampal formation | 9.59 | |
| 10.09 | | |||
| Ier3ip1 | HY | Hypothalamus | 1.24 | |
| 1.13 | | |||
| Ier3ip1 | LSX | Lateral septal complex | 0.51 | |
| 0.81 | | |||
| Ier3ip1 | MB | Midbrain | 2.9 | |
| 3.54 | | |||
| Ier3ip1 | MY | Medulla | 2.78 | |
| 4.46 | | |||
| Ier3ip1 | OLF | Olfactory bulb | 1.79 | |
| 2.57 | | |||
| Ier3ip1 | P | Pons | 2.75 | |
| 3.76 | | |||
| Ier3ip1 | PAL | Pallidum | 0.82 | |
| 1.29 | | |||
| Ier3ip1 | RHP | Retrohippocampal region | 1.31 | |
| 1.09 | | |||
| Ier3ip1 | sAMY | Striatum-like amygdalar nuclei | 0.43 | |
| 0.4 | | |||
| Ier3ip1 | STR | Striatum | 0.37 | |
| 0.53 | | |||
| Ier3ip1 | STRd | Striatum dorsal region | 0.38 | |
| 0.55 | | |||
| Ier3ip1 | STRv | Striatum ventral region | 0.3 | |
| 0.53 | | |||
| Ier3ip1 | TH | Thalamus | 1.58 | |
| 1.75 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00075346 | 20 | 30 | 49 | NIGWGTDQGIGGFGEEPGIK | Peptide Atlas |