Annotation Detail for CERCAM
Basic Information Top
| Gene Symbol: | CERCAM ( CEECAM1,GLT25D3,MGC149620,MGC149621 ) |
|---|---|
| Gene Full Name: | cerebral endothelial cell adhesion molecule |
| Band: | 9q34.11 |
| Quick Links | Entrez ID:51148; OMIM: NA; Uniprot ID:GT253_HUMAN; ENSEMBL ID: ENSG00000167123; HGNC ID: 23723 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.495230
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 45 / 564012 | 79 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 |  |
| juvenile | 1 / 55556 | 17 | |
| adult | 236 / 1939121 | 121 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 6 / 94178 | 63 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 11 / 82823 | 132 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 13 / 263845 | 49 | |
| glioma | 14 / 106883 | 130 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 6 / 68959 | 87 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 4 / 103127 | 38 | |
| lymphoma | 7 / 71755 | 97 | |
| non-neoplasia | 11 / 97250 | 113 | |
| normal | 359 / 3360307 | 106 | |
| ovarian tumor | 12 / 76682 | 156 | |
| pancreatic tumor | 20 / 104616 | 191 | |
| primitive neuroectodermal tumor of the CNS | 10 / 125680 | 79 | |
| prostate cancer | 11 / 102680 | 107 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 5 / 124949 | 40 | |
| soft tissue/muscle tissue tumor | 13 / 125191 | 103 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 |  |
| bone | 11 / 71655 | 153 | |
| bone marrow | 3 / 48801 | 61 | |
| brain | 147 / 1100989 | 133 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 13 / 149255 | 87 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 9 / 215722 | 41 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 12 / 211054 | 56 | |
| heart | 9 / 89626 | 100 | |
| intestine | 10 / 234472 | 42 | |
| kidney | 13 / 211777 | 61 | |
| larynx | 0 / 24145 | 0 | |
| liver | 4 / 207743 | 19 | |
| lung | 16 / 336974 | 47 | |
| lymph | 7 / 44270 | 158 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 19 / 153271 | 123 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 9 / 107715 | 83 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 23 / 102051 | 225 |  |
| pancreas | 44 / 214812 | 204 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 3 / 16585 | 180 | |
| placenta | 90 / 280825 | 320 | |
| prostate | 15 / 189345 | 79 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 17 / 210574 | 80 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 4 / 330442 | 12 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 14 / 232878 | 60 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: CUST_5979_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.32 ± 1.04 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.83 ± 0.77 | |
| Basal Part of Pons | 5.48 ± 1.13 | |
| Cerebellar Cortex | 4.76 ± 0.57 | |
| Cerebellar Nuclei | 5.86 ± 0.93 | |
| Claustrum | 4.33 ± 0.84 | |
| Epithalamus | 4.99 ± 1.28 | |
| Frontal Lobe | 5.17 ± 1.11 | |
| Globus Pallidus | 7.09 ± 0.34 | |
| Hypothalamus | 4.75 ± 0.77 | |
| Insula | 4.35 ± 1.03 | |
| Limbic Lobe | 4.49 ± 0.94 | |
| Mesencephalon | 5.32 ± 1.03 | |
| Myelencephalon | 5.27 ± 0.87 | |
| Occipital Lobe | 5.21 ± 0.95 | |
| Parietal Lobe | 4.98 ± 1.1 | |
| Pontine Tegmentum | 5.16 ± 0.8 | |
| Striatum | 6.25 ± 0.9 | |
| Subthalamus | 5.49 ± 0.7 | |
| Temporal Lobe | 4.78 ± 0.92 | |
| Thalamus | 5.83 ± 0.78 | |
| White Matter | 8.78 ± 0.24 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ceecam1 | CB | Cerebellum | 4.84 | |
| 4.66 | | |||
| Ceecam1 | CTX | Cerebral cortex | 1.64 | |
| 1.35 | | |||
| Ceecam1 | HIP | Hippocampal region | 1.61 | |
| 1.43 | | |||
| Ceecam1 | HPF | Hippocampal formation | 1.57 | |
| 1.67 | | |||
| Ceecam1 | HY | Hypothalamus | 0.56 | |
| 0.37 | | |||
| Ceecam1 | LSX | Lateral septal complex | 1.49 | |
| 0.82 | | |||
| Ceecam1 | MB | Midbrain | 0.81 | |
| 0.75 | | |||
| Ceecam1 | MY | Medulla | 0.84 | |
| 0.75 | | |||
| Ceecam1 | OLF | Olfactory bulb | 1.77 | |
| 2.21 | | |||
| Ceecam1 | P | Pons | 0.71 | |
| 0.66 | | |||
| Ceecam1 | PAL | Pallidum | 1.07 | |
| 0.75 | | |||
| Ceecam1 | RHP | Retrohippocampal region | 1.43 | |
| 2.07 | | |||
| Ceecam1 | sAMY | Striatum-like amygdalar nuclei | 0.81 | |
| 0.45 | | |||
| Ceecam1 | STR | Striatum | 0.75 | |
| 0.5 | | |||
| Ceecam1 | STRd | Striatum dorsal region | 0.67 | |
| 0.49 | | |||
| Ceecam1 | STRv | Striatum ventral region | 0.66 | |
| 0.42 | | |||
| Ceecam1 | TH | Thalamus | 1.12 | |
| 0.87 | |