AutismKB 2.0

Annotation Detail for RSL24D1


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Basic Information Top
Gene Symbol:RSL24D1 ( C15orf15,HRP-L30-iso,L30,RLP24,RPL24,RPL24L,TVAS3 )
Gene Full Name: ribosomal L24 domain containing 1
Band: 15q21.3
Quick LinksEntrez ID:51187; OMIM: 613262; Uniprot ID:RLP24_HUMAN; ENSEMBL ID: ENSG00000137876; HGNC ID: 18479
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body15 / 70761211
blastocyst4 / 6231964
fetus40 / 56401270
neonate1 / 3109732
infant8 / 23620338
juvenile3 / 5555653
adult245 / 1939121126
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma51 / 174752918
breast (mammary gland) tumor12 / 94178127
cervical tumor15 / 34366436
chondrosarcoma13 / 82823156
colorectal tumor13 / 114246113
esophageal tumor0 / 172900 
gastrointestinal tumor3 / 11936925
germ cell tumor188 / 263845712
glioma34 / 106883318
head and neck tumor2 / 13630214
kidney tumor19 / 68959275
leukemia203 / 958422118
liver tumor10 / 96359103
lung tumor12 / 103127116
lymphoma9 / 71755125
non-neoplasia6 / 9725061
normal406 / 3360307120
ovarian tumor12 / 76682156
pancreatic tumor8 / 10461676
primitive neuroectodermal tumor of the CNS16 / 125680127
prostate cancer80 / 102680779
retinoblastoma17 / 46356366
skin tumor44 / 124949352
soft tissue/muscle tissue tumor24 / 125191191
uterine tumor8 / 9025788
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland2 / 3319760
ascites0 / 400150 
bladder52 / 297571747
blood23 / 123478186
bone13 / 71655181
bone marrow207 / 488014241
brain212 / 1100989192
cervix19 / 48171394
connective tissue22 / 149255147
ear0 / 162120 
embryonic tissue28 / 215722129
esophagus0 / 202090 
eye28 / 211054132
heart9 / 89626100
intestine22 / 23447293
kidney41 / 211777193
larynx0 / 241450 
liver36 / 207743173
lung47 / 336974139
lymph5 / 44270112
lymph node5 / 9161054
mammary gland15 / 15327197
mouth4 / 6705259
muscle40 / 107715371
nerve2 / 15768126
ovary14 / 102051137
pancreas35 / 214812162
parathyroid6 / 20539292
pharynx5 / 41328120
pituitary gland4 / 16585241
placenta21 / 28082574
prostate88 / 189345464
salivary gland136 / 201556747
skin59 / 210574280
spleen5 / 5395292
stomach0 / 966190 
testis203 / 330442614
thymus4 / 8113149
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord1 / 1368073
uterus25 / 232878107
vascular24 / 51780463
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 217915_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts1418.75
Adipocyte131.2
AdrenalCortex62.45
Adrenalgland14.2
Amygdala205.3
Appendix169.3
AtrioventricularNode49.3
BDCA4+_DentriticCells431
Bonemarrow42
BronchialEpithelialCells649.15
CD105+_Endothelial414.9
CD14+_Monocytes579.15
CD19+_BCells(neg._sel.)745.55
CD33+_Myeloid437.35
CD34+636.9
CD4+_Tcells515.85
CD56+_NKCells410.25
CD71+_EarlyErythroid219.85
CD8+_Tcells547.7
CardiacMyocytes363.6
Caudatenucleus42.8
Cerebellum96.8
CerebellumPeduncles48.5
CiliaryGanglion46.75
CingulateCortex79.45
Colorectaladenocarcinoma160.9
DorsalRootGanglion44.3
FetalThyroid58.7
Fetalbrain320.5
Fetalliver145.25
Fetallung202.85
GlobusPallidus39.35
Heart53.05
Hypothalamus180.85
Kidney21.7
Leukemia_chronicMyelogenousK-562665.2
Leukemia_promyelocytic-HL-60836.7
Leukemialymphoblastic(MOLT-4)381.85
Liver33.2
Lung24.4
Lymphnode149.6
Lymphoma_burkitts(Daudi)1263.5
Lymphoma_burkitts(Raji)808.35
MedullaOblongata105.45
OccipitalLobe130.75
OlfactoryBulb114.9
Ovary230.4
Pancreas142.05
PancreaticIslet286
ParietalLobe72.1
Pituitary220.4
Placenta39.7
Pons48.55
PrefrontalCortex152.55
Prostate126.1
Salivarygland160.95
SkeletalMuscle65
Skin47.05
SmoothMuscle345.4
Spinalcord84
SubthalamicNucleus39.5
SuperiorCervicalGanglion77.75
TemporalLobe111.2
Testis27.95
TestisGermCell157.5
TestisIntersitial174.2
TestisLeydigCell76.5
TestisSeminiferousTubule94.7
Thalamus82.15
Thymus51.4
Thyroid269.65
Tongue64.65
Tonsil168.95
Trachea113.2
TrigeminalGanglion82.25
Uterus344.3
UterusCorpus134.65
WholeBlood335.45
Wholebrain146.8
colon346.35
pineal_day500.02
pineal_night523.24
retina119.6
small_intestine199.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P416014
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala9.01 ± 0.28
Basal Forebrain8.51 ± 0.31
Basal Part of Pons8.99 ± 0.28
Cerebellar Cortex8.85 ± 0.49
Cerebellar Nuclei8.71 ± 0.33
Claustrum8.9 ± 0.39
Epithalamus8.59 ± 0.37
Frontal Lobe8.79 ± 0.32
Globus Pallidus8.67 ± 0.1
Hypothalamus8.74 ± 0.32
Insula8.87 ± 0.37
Limbic Lobe9.07 ± 0.33
Mesencephalon8.88 ± 0.4
Myelencephalon8.79 ± 0.32
Occipital Lobe9.22 ± 0.38
Parietal Lobe8.89 ± 0.28
Pontine Tegmentum8.83 ± 0.22
Striatum8.74 ± 0.19
Subthalamus8.75 ± 0.28
Temporal Lobe8.78 ± 0.31
Thalamus8.84 ± 0.27
White Matter8.86 ± 0.4
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
BC003885CBCerebellum14.6
15.79
BC003885CTXCerebral cortex35.83
26.02
BC003885HIPHippocampal region33.29
45.68
BC003885HPFHippocampal formation38.81
43.27
BC003885HYHypothalamus7.78
6.36
BC003885LSXLateral septal complex10.22
6.93
BC003885MBMidbrain12.74
11.46
BC003885MYMedulla13.31
13.85
BC003885OLFOlfactory bulb36.32
30.37
BC003885PPons10.18
10.09
BC003885PALPallidum15.11
14.25
BC003885RHPRetrohippocampal region51.21
41.74
BC003885sAMYStriatum-like amygdalar nuclei30.86
23.46
BC003885STRStriatum20.92
15.04
BC003885STRdStriatum dorsal region19.25
13.76
BC003885STRvStriatum ventral region28.45
19.83
BC003885THThalamus17.43
14.69
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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