Annotation Detail for TMEM85
Basic Information Top
| Gene Symbol: | TMEM85 ( FLJ90746,MGC24415,PIG17 ) |
|---|---|
| Gene Full Name: | transmembrane protein 85 |
| Band: | 15q14 |
| Quick Links | Entrez ID:51234; OMIM: NA; Uniprot ID:TMM85_HUMAN; ENSEMBL ID: ENSG00000128463; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.250905
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 8 / 70761 | 113 |  |
| blastocyst | 4 / 62319 | 64 | |
| fetus | 47 / 564012 | 83 | |
| neonate | 2 / 31097 | 64 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 |  |
| adult | 204 / 1939121 | 105 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 11 / 94178 | 116 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 26 / 82823 | 313 |  |
| colorectal tumor | 6 / 114246 | 52 | |
| esophageal tumor | 2 / 17290 | 115 | |
| gastrointestinal tumor | 14 / 119369 | 117 | |
| germ cell tumor | 13 / 263845 | 49 | |
| glioma | 13 / 106883 | 121 | |
| head and neck tumor | 8 / 136302 | 58 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 8 / 95842 | 83 | |
| liver tumor | 14 / 96359 | 145 | |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 321 / 3360307 | 95 | |
| ovarian tumor | 10 / 76682 | 130 | |
| pancreatic tumor | 7 / 104616 | 66 | |
| primitive neuroectodermal tumor of the CNS | 6 / 125680 | 47 | |
| prostate cancer | 7 / 102680 | 68 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 7 / 124949 | 56 | |
| soft tissue/muscle tissue tumor | 18 / 125191 | 143 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 8 / 40015 | 199 | |
| bladder | 0 / 29757 | 0 | |
| blood | 6 / 123478 | 48 | |
| bone | 18 / 71655 | 251 | |
| bone marrow | 4 / 48801 | 81 | |
| brain | 79 / 1100989 | 71 | |
| cervix | 9 / 48171 | 186 | |
| connective tissue | 23 / 149255 | 154 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 20 / 215722 | 92 | |
| esophagus | 2 / 20209 | 98 | |
| eye | 17 / 211054 | 80 | |
| heart | 5 / 89626 | 55 | |
| intestine | 16 / 234472 | 68 | |
| kidney | 6 / 211777 | 28 | |
| larynx | 1 / 24145 | 41 | |
| liver | 25 / 207743 | 120 | |
| lung | 40 / 336974 | 118 | |
| lymph | 3 / 44270 | 67 | |
| lymph node | 10 / 91610 | 109 | |
| mammary gland | 16 / 153271 | 104 | |
| mouth | 7 / 67052 | 104 | |
| muscle | 8 / 107715 | 74 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 10 / 102051 | 97 | |
| pancreas | 53 / 214812 | 246 | |
| parathyroid | 8 / 20539 | 389 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 46 / 280825 | 163 | |
| prostate | 11 / 189345 | 58 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 28 / 210574 | 132 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 12 / 96619 | 124 | |
| testis | 18 / 330442 | 54 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 2 / 13680 | 146 | |
| uterus | 10 / 232878 | 42 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_23_P106481
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.54 ± 0.64 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.93 ± 0.3 | |
| Basal Part of Pons | 9.47 ± 0.3 | |
| Cerebellar Cortex | 9.16 ± 0.34 | |
| Cerebellar Nuclei | 9.39 ± 0.37 | |
| Claustrum | 8.35 ± 0.74 | |
| Epithalamus | 9.22 ± 0.29 | |
| Frontal Lobe | 9.3 ± 0.34 | |
| Globus Pallidus | 8.74 ± 0.4 | |
| Hypothalamus | 9.49 ± 0.26 | |
| Insula | 9.21 ± 0.28 | |
| Limbic Lobe | 8.74 ± 0.66 | |
| Mesencephalon | 8.93 ± 0.5 | |
| Myelencephalon | 8.96 ± 0.58 | |
| Occipital Lobe | 8.45 ± 0.66 | |
| Parietal Lobe | 9.06 ± 0.5 | |
| Pontine Tegmentum | 9.04 ± 0.49 | |
| Striatum | 8.43 ± 0.46 | |
| Subthalamus | 9.43 ± 0.42 | |
| Temporal Lobe | 9.18 ± 0.44 | |
| Thalamus | 9.03 ± 0.4 | |
| White Matter | 9.11 ± 0.38 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Tmem85 | CB | Cerebellum | 62.14 | |
| 100 | | |||
| Tmem85 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Tmem85 | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Tmem85 | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Tmem85 | HY | Hypothalamus | 90.28 | |
| 95.16 | | |||
| Tmem85 | LSX | Lateral septal complex | 100 | |
| 100 | | |||
| Tmem85 | MB | Midbrain | 96.35 | |
| 100 | | |||
| Tmem85 | MY | Medulla | 77.8 | |
| 100 | | |||
| Tmem85 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Tmem85 | P | Pons | 78.9 | |
| 100 | | |||
| Tmem85 | PAL | Pallidum | 89.56 | |
| 100 | | |||
| Tmem85 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Tmem85 | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Tmem85 | STR | Striatum | 100 | |
| 100 | | |||
| Tmem85 | STRd | Striatum dorsal region | 100 | |
| 100 | | |||
| Tmem85 | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| Tmem85 | TH | Thalamus | 100 | |
| 100 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00001317 | 23 | 151 | 173 | CQSMGLLPTHASDWLAFIEPPER | Peptide Atlas |
| TMM85_HUMAN_2 | 10 | 2 | 11 | TAQGGLVANR | PRIDE |